From 658f741111b0622fe277978e11cacde4b261f712 Mon Sep 17 00:00:00 2001 From: James Gebbie-Rayet Date: Wed, 16 Sep 2026 12:09:10 +0100 Subject: [PATCH 1/2] Specify conda-forge channel for package installations --- docker/Dockerfile | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/docker/Dockerfile b/docker/Dockerfile index 66b3f44..30c6a73 100644 --- a/docker/Dockerfile +++ b/docker/Dockerfile @@ -10,10 +10,10 @@ WORKDIR $HOME # Install workshop deps RUN conda install -y -c conda-forge \ - matplotlib=3.11.1 \ - numpy=2.5.3 \ - nglview=4.0.1 \ - ipywidgets=8.1.9 + conda-forge::matplotlib=3.11.1 \ + conda-forge::numpy=2.5.3 \ + conda-forge::nglview=4.0.1 \ + conda-forge::ipywidgets=8.1.9 RUN pip install --no-cache-dir \ mdtraj==1.11.1 \ mdplus==0.1.2 From b1cce055c6caaf0b62f52cd9cc1b2894ad5e441a Mon Sep 17 00:00:00 2001 From: James Gebbie-Rayet Date: Wed, 16 Sep 2026 12:10:44 +0100 Subject: [PATCH 2/2] Update renovate.json --- .github/renovate.json | 29 +++++++++++++++++++++++++++++ 1 file changed, 29 insertions(+) diff --git a/.github/renovate.json b/.github/renovate.json index c54154b..8ffd0ab 100644 --- a/.github/renovate.json +++ b/.github/renovate.json @@ -15,5 +15,34 @@ "groupName": "GitHub Actions", "addLabels": ["ci", "dependencies"] } + ], + "customManagers": [ + { + "customType": "regex", + "managerFilePatterns": [ + "/(^|/)Dockerfile[^/]*$/" + ], + "matchStringsStrategy": "recursive", + "matchStrings": [ + "pip3? install[\\s\\S]*?(?(?:[\\w.-]+==[\\w.-]+[\\s\\\\]*)+)", + "(?[\\w.-]+)==(?[\\w.-]+)" + ], + "datasourceTemplate": "pypi", + "versioningTemplate": "pep440" + }, + { + "customType": "regex", + "managerFilePatterns": [ + "/(^|/)Dockerfile[^/]*$/" + ], + "matchStringsStrategy": "recursive", + "matchStrings": [ + "(?:mamba|conda) install[\\s\\S]*?(?(?:(?:[\\w-]+::)?[\\w.-]+=[\\w.-]+[\\s\\\\]*)+)", + "(?:(?[\\w-]+)::)?(?[\\w.-]+)=(?[\\w.-]+)" + ], + "datasourceTemplate": "conda", + "registryUrlTemplate": "https://api.anaconda.org/package/{{#if channel}}{{channel}}{{else}}conda-forge{{/if}}/", + "versioningTemplate": "pep440" + } ] }