-
Notifications
You must be signed in to change notification settings - Fork 1
Expand file tree
/
Copy pathsvm.py
More file actions
executable file
·178 lines (140 loc) · 6.37 KB
/
Copy pathsvm.py
File metadata and controls
executable file
·178 lines (140 loc) · 6.37 KB
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
import time
import numpy as np
from glob import glob
from PIL import Image
from sklearn.svm import SVR
from sklearn.ensemble import BaggingRegressor
import utils
from constants import IMG_SIZE_X
from constants import IMG_SIZE_Y
from constants import SVM_WINDOW_SIZE_X
from constants import SVM_WINDOW_SIZE_Y
from constants import DATA_DIR_TRAIN
from constants import JSON_FILE
class SVM:
def __init__(self):
estimators = 10
self.classifier = BaggingRegressor(SVR(), max_samples=1.0/estimators, n_estimators=estimators, n_jobs=-1)
self.regression_x = BaggingRegressor(SVR(), max_samples=1.0/estimators, n_estimators=estimators, n_jobs=-1)
self.regression_y = BaggingRegressor(SVR(), max_samples=1.0/estimators, n_estimators=estimators, n_jobs=-1)
self.regression_height = BaggingRegressor(SVR(), max_samples=1.0/estimators, n_estimators=estimators, n_jobs=-1)
self.regression_width = BaggingRegressor(SVR(), max_samples=1.0/estimators, n_estimators=estimators, n_jobs=-1)
def load_training_data(self, image_dir=DATA_DIR_TRAIN, polygon_file=JSON_FILE):
tif_files = glob(image_dir + '*.tif')
polygons = utils.load_polygons(polygon_file)
X = []
y = []
for tif in tif_files:
data = self.create_training_data_image(tif, polygons)
X.extend(data[0])
y.extend(data[1])
self.conditioned_train_test_split(X, y, 0.2, 0.4)
def create_training_data_image(self, filename, pvs, window_x=SVM_WINDOW_SIZE_X, window_y=SVM_WINDOW_SIZE_Y):
# TODO: add meaningful features
img = Image.open(filename)
img_array = np.array(img)
if IMG_SIZE_X != img_array.shape[0] or IMG_SIZE_Y != img_array.shape[1]:
print(('Input image doesn\'t have the right size'), filename)
return
X = []
y = []
for x in range(0, IMG_SIZE_X, SVM_WINDOW_SIZE_X):
for y in range(0, IMG_SIZE_Y, SVM_WINDOW_SIZE_Y):
x_end = x + SVM_WINDOW_SIZE_X
y_end = y + SVM_WINDOW_SIZE_Y
X.append(img_array[x:x_end, y:y_end, :3])
# target = [confidence, x, y, h, w]
target = np.array([0, 0, 0, 0, 0], dtype=np.float32)
for pv in pvs:
if x <= pv.center_x <= x_end and y <= pv.center_y <= y_end:
x_relative = (pv.center_x - x) / SVM_WINDOW_SIZE_X
y_relative = (pv.center_y - y) / SVM_WINDOW_SIZE_Y
target = np.array([1, x_relative, y_relative, pv.height, pv.width], dtype=np.float32)
y.append(target)
return X, y
def conditioned_train_test_split(self, X, y, test_size, min_positive_size):
num_total = len(X)
num_test = int(num_total * test_size)
num_test_positive = int(num_test * min_positive_size)
perm = np.random.permutation(num_total)
X = [X[i] for i in perm]
y = [y[i] for i in perm]
X_train = []
y_train = []
X_test = []
y_test = []
indices = []
for i in range(len(X)):
if y[i][0] == 1:
X_test.append(X[i])
y_test.append(y[i])
indices.append((i))
if len(y_test) >= num_test_positive:
break
num_test_positive_actual = len(y_test)
if num_test_positive_actual <= num_test_positive:
num_train_positive = int((1 - min_positive_size) * num_test_positive_actual)
for i in reversed(range(num_train_positive)):
X_train.append(X_test.pop(i))
y_train.append(y_test.pop(i))
del indices[i]
for idx in reversed(indices):
del X[idx]
del y[idx]
num_test = int(len(y_test) / min_positive_size)
num_train = int(num_test / test_size)
while len(X_test) <= num_test:
idx = np.random.randint(len(X))
X_test.append(X[idx])
y_test.append(y[idx])
del X[idx]
del y[idx]
# pruning negative training examples
while len(X_train) <= num_train:
idx = np.random.randint(len(X))
X_train.append(X[idx])
y_train.append(y[idx])
self.X_train = np.array(X_train)
self.y_train = np.array(y_train)
self.X_test = np.array(X_test)
self.y_test = np.array(y_test)
def fit(self, X, y):
X = np.array(X)
y = np.array(y)
num_samples = X.shape[0]
X = X.reshape(num_samples, -1)
start = time.time()
self.classifier.fit(X, y[:, 0])
print('Training of Classifier done, took: {:5.2f}s'.format(time.time() - start))
start = time.time()
self.regression_x.fit(X, y[:, 1])
print('Training of Regressor for X done, took: {:5.2f}s'.format(time.time() - start))
start = time.time()
self.regression_y.fit(X, y[:, 2])
print('Training of Regressor for Y done, took: {:5.2f}s'.format(time.time() - start))
start = time.time()
self.regression_height.fit(X, y[:, 3])
print('Training of Regressor for height done, took: {:5.2f}s'.format(time.time() - start))
start = time.time()
self.regression_width.fit(X, y[:, 4])
print('Training of Regressor for width done, took: {:5.2f}s'.format(time.time() - start))
def predict(self, X):
l = len(X)
X = X.reshape(l, -1)
prediction = []
start = time.time()
prediction.append(self.classifier.predict(X))
print('Prediction for confidence done, took: {:5.2f}s'.format(time.time() - start))
start = time.time()
prediction.append(self.regression_x.predict(X))
print('Prediction for X done, took: {:5.2f}s'.format(time.time() - start))
start = time.time()
prediction.append(self.regression_y.predict(X))
print('Prediction for Y done, took: {:5.2f}s'.format(time.time() - start))
start = time.time()
prediction.append(self.regression_height.predict(X))
print('Prediction for height done, took: {:5.2f}s'.format(time.time() - start))
start = time.time()
prediction.append(self.regression_width.predict(X))
print('Prediction for width done, took: {:5.2f}s'.format(time.time() - start))
return np.array(prediction, dtype=np.float32).transpose()