Issues

• Split FASTA by x

  Rust-Wellcome/FasMan#51 · Filter by author DLBPointon opened on Nov 22, 2024
  6

  

• Header cleaning

  enhancement
  Rust-Wellcome/FasMan#50 · Filter by author DLBPointon opened on Sep 25, 2024
  

• Split long chromosomes into >2Gb chunks

  enhancement
  Rust-Wellcome/FasMan#49 · Filter by author DLBPointon opened on Sep 3, 2024
  1

  

• Create tests for the yaml validator

  CICDTesting
  Rust-Wellcome/FasMan#45 · Filter by author stevieing opened on Aug 20, 2024
  

• ID some FASTA specific functions to add to FasMan

  enhancementhelp wanted
  Rust-Wellcome/FasMan#40 · Filter by author DLBPointon opened on Jul 18, 2024

• Noodles-indexed reader requires TSV

  Rust-Wellcome/FasMan#39 · Filter by author DLBPointon opened on Jul 17, 2024

• tpf_fasta requires an fai

  bug
  Rust-Wellcome/FasMan#36 · Filter by author DLBPointon opened on Jul 3, 2024

• exclude_seq should use some kind of regex to also extract_seq

  enhancement
  Rust-Wellcome/FasMan#35 · Filter by author DLBPointon opened on Jul 3, 2024
  1

• CICD: Automate Docs getting generated and uploaded to a Pages instance

  documentationenhancement
  Rust-Wellcome/FasMan#34 · Filter by author DLBPointon opened on Jul 3, 2024
  1

  

• Optimisations

  Rust-Wellcome/FasMan#32 · Filter by author dasunpubudumal opened on Jun 20, 2024
  4

• Improve the documentation significantly

  Rust-Wellcome/FasMan#29 · Filter by author DLBPointon opened on Jun 6, 2024
  

• Improve logging in the application

  enhancement
  Rust-Wellcome/FasMan#28 · Filter by author dasunpubudumal opened on Jun 4, 2024

• IMPROVEMENT: Replace print statements with proper logging

  Easy
  Rust-Wellcome/FasMan#27 · Filter by author DLBPointon opened on May 30, 2024
  1

• Implement file reader to read files chunk-by-chunk

  enhancement
  Rust-Wellcome/FasMan#24 · Filter by author dasunpubudumal opened on May 26, 2024

• UPDATE: yaml_validator

  Easy
  Rust-Wellcome/FasMan#15 · Filter by author DLBPointon opened on May 10, 2024
  4

  

• SUBWORKFLOW: Profile fasta file

  Medium
  Rust-Wellcome/FasMan#12 · Filter by author DLBPointon opened on May 9, 2024
  2

  

• SUBWORKFLOW: Merge Haplotypes

  Easy
  Rust-Wellcome/FasMan#9 · Filter by author DLBPointon opened on May 9, 2024