From ba1accd1c6c5336ec39cb29f052523bce6814b89 Mon Sep 17 00:00:00 2001
From: "dependabot[bot]" <49699333+dependabot[bot]@users.noreply.github.com>
Date: Tue, 13 Oct 2026 04:18:33 +0000
Subject: [PATCH] Bump omegaconf from 2.3.1 to 2.4.0

Bumps [omegaconf](https://github.com/hydra-ecosystem/omegaconf) from 2.3.1 to 2.4.0.
- [Release notes](https://github.com/hydra-ecosystem/omegaconf/releases)
- [Changelog](https://github.com/hydra-ecosystem/omegaconf/blob/main/NEWS.md)
- [Commits](https://github.com/hydra-ecosystem/omegaconf/compare/v2.3.1...v2.4.0)

---
updated-dependencies:
- dependency-name: omegaconf
  dependency-version: 2.4.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
---
 pyproject.toml |  2 +-
 uv.lock        | 23 +++++++----------------
 2 files changed, 8 insertions(+), 17 deletions(-)

diff --git a/pyproject.toml b/pyproject.toml
index 86ae8497..8de2d3a6 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -150,7 +150,7 @@ ebm = [
 # rather than fixed upstream.
 survivalpfn = [
     "survivalpfn @ git+https://github.com/rgklab/SurvivalPFN.git",
-    "omegaconf>=2.3.0",
+    "omegaconf>=2.4.0",
 ]
 
 # MEDS-Tab (odyssey/inference/meds_tab_baseline.py), a fifth comparator: the
diff --git a/uv.lock b/uv.lock
index a7ec26be..023763cd 100644
--- a/uv.lock
+++ b/uv.lock
@@ -52,12 +52,6 @@ wheels = [
     { url = "https://files.pythonhosted.org/packages/99/91/8acff4f5e50511b911bbccb72b8628a49c68ce14148cd9f6431094859a90/annotated_types-0.8.0-py3-none-any.whl", hash = "sha256:f072f4d804ea359e4eaf198b1af7a8b0943881a87f31bb764f8bf219bb9419e0", size = 13427, upload-time = "2026-07-23T20:16:12.938Z" },
 ]
 
-[[package]]
-name = "antlr4-python3-runtime"
-version = "4.9.3"
-source = { registry = "https://pypi.org/simple" }
-sdist = { url = "https://files.pythonhosted.org/packages/3e/38/7859ff46355f76f8d19459005ca000b6e7012f2f1ca597746cbcd1fbfe5e/antlr4-python3-runtime-4.9.3.tar.gz", hash = "sha256:f224469b4168294902bb1efa80a8bf7855f24c99aef99cbefc1bcd3cce77881b", size = 117034, upload-time = "2021-11-06T17:52:23.524Z" }
-
 [[package]]
 name = "anyio"
 version = "4.15.1"
@@ -1080,16 +1074,14 @@ wheels = [
 
 [[package]]
 name = "hydra-core"
-version = "1.3.7"
+version = "1.4.0rc1"
 source = { registry = "https://pypi.org/simple" }
 dependencies = [
-    { name = "antlr4-python3-runtime" },
     { name = "omegaconf" },
-    { name = "packaging" },
 ]
-sdist = { url = "https://files.pythonhosted.org/packages/5c/a9/fe2c936f36881e3197a8800f5bfba078d7846d54eb5d009b445eda1ee281/hydra_core-1.3.7.tar.gz", hash = "sha256:d4ff629c7e23b64a9db5fe5b027cf7c55b633b737f03be51ef41b77ed016f75e", size = 3278662, upload-time = "2026-09-14T18:02:55.528Z" }
+sdist = { url = "https://files.pythonhosted.org/packages/eb/44/f2aa54343593132838e9f72992fcef627d168a6b2a4a7f4e4bca3e0ad96f/hydra_core-1.4.0rc1.tar.gz", hash = "sha256:a00aa0b9ba4ce3f012fdda5b600b535c1a40bc8b6c894de4b1c4fb3d5b2fedf8", size = 3373272, upload-time = "2026-10-10T07:46:48.444Z" }
 wheels = [
-    { url = "https://files.pythonhosted.org/packages/25/0c/21890c10cc94da917c8e47efc1c55cd3e56a1d25ab5947bdd35abaf9fdc1/hydra_core-1.3.7-py3-none-any.whl", hash = "sha256:83606c4a05c770f1e026e0489875f28989829d151799eabd8cfa8cbe82164515", size = 168790, upload-time = "2026-09-14T18:02:53.661Z" },
+    { url = "https://files.pythonhosted.org/packages/3f/e6/37ca8e464e6786103edbd87d7f964bbbd8dd666254ff3dbf3106f1344efa/hydra_core-1.4.0rc1-py3-none-any.whl", hash = "sha256:0c158b4b3b3daa07a10a1e144f28e13cbbdfe054b174621ad108e3c53a54d312", size = 196222, upload-time = "2026-10-10T07:46:37.803Z" },
 ]
 
 [[package]]
@@ -2672,7 +2664,7 @@ requires-dist = [
     { name = "mamba-ssm", marker = "extra == 'cuda'", specifier = "==2.3.0" },
     { name = "meds-tab", marker = "extra == 'meds-tab'", specifier = ">=0.2.0" },
     { name = "mimic-iv-meds" },
-    { name = "omegaconf", marker = "extra == 'survivalpfn'", specifier = ">=2.3.0" },
+    { name = "omegaconf", marker = "extra == 'survivalpfn'", specifier = ">=2.4.0" },
     { name = "pandas", marker = "extra == 'gemini'", specifier = ">=3.0.6" },
     { name = "polars", specifier = ">=1.44.2" },
     { name = "polars", marker = "extra == 'gemini'", specifier = ">=1.44.2" },
@@ -2715,15 +2707,14 @@ docs = [
 
 [[package]]
 name = "omegaconf"
-version = "2.3.1"
+version = "2.4.0"
 source = { registry = "https://pypi.org/simple" }
 dependencies = [
-    { name = "antlr4-python3-runtime" },
     { name = "pyyaml" },
 ]
-sdist = { url = "https://files.pythonhosted.org/packages/ce/3d/e4b57b8d9008c6ebe0d5eff901f91d5700cf7bdb8c8863df817463a7fd5e/omegaconf-2.3.1.tar.gz", hash = "sha256:e5e7de64aeebeddaf8e6d3f7a783b32ac2a01c0fbd9c878012caecb891a1f42a", size = 3298472, upload-time = "2026-06-11T05:05:12.885Z" }
+sdist = { url = "https://files.pythonhosted.org/packages/cc/10/1cabf3188a4d9684a06568c7fd76f9536eede625733c8399cf1f5337b83e/omegaconf-2.4.0.tar.gz", hash = "sha256:7e219a70bea371da250285b9c01c7db027bc421722799c2cc4ff14bc4a2a753b", size = 3544508, upload-time = "2026-10-09T12:44:02.326Z" }
 wheels = [
-    { url = "https://files.pythonhosted.org/packages/a4/0e/152509871bf30df6fc38569f52a2db9b55dd41aae957adae50a053ac7778/omegaconf-2.3.1-py3-none-any.whl", hash = "sha256:3d701d14e9a8828f1edd28bb70b725908b34277cdd72cf7d6a83f94dadc6b6a0", size = 79502, upload-time = "2026-06-11T05:05:09.954Z" },
+    { url = "https://files.pythonhosted.org/packages/4f/bd/0d9f8247b0819385213d09564eda5c52d3673313c2414d51f72883ec24cd/omegaconf-2.4.0-py3-none-any.whl", hash = "sha256:f141a664c777582405e3cc6e0545ecc79429e79f844995b1a6e71c35946a025c", size = 254152, upload-time = "2026-10-09T12:43:59.764Z" },
 ]
 
 [[package]]