diff --git a/css/style.css b/css/style.css index d2102d9..70601cc 100644 --- a/css/style.css +++ b/css/style.css @@ -1161,8 +1161,6 @@ label { .twitter a:hover { background: url(../img/social/twitter.png) no-repeat bottom center; } .vimeo a { background: url(../img/social/vimeo.png) no-repeat top center; } .vimeo a:hover { background: url(../img/social/vimeo.png) no-repeat bottom center; } - .google a { background: url(../img/social/google+.png) no-repeat top center; } - .google a:hover { background: url(../img/social/google+.png) no-repeat bottom center; } .yahoo a { background: url(../img/social/yahoo.png) no-repeat top center; } .yahoo a:hover { background: url(../img/social/yahoo.png) no-repeat bottom center; } diff --git a/data/datafiles.json b/data/datafiles.json index fa7dfc9..87b6591 100644 --- a/data/datafiles.json +++ b/data/datafiles.json @@ -5,14 +5,14 @@ "description": "Arepo dataset of a head-on galaxy cluster merger", "filename": "ArepoBullet", "size": "770 MB", - "url": "http://yt-project.org/data/ArepoBullet.tar.gz" + "url": "https://yt-project.org/data/ArepoBullet.tar.gz" }, { "code": "Arepo", "description": "Cut-out of a galaxy cluster halo from the TNG300 simulation, including gas, DM, and stars. The center of the cluster is at [48669.34, 53984.04, 62114.90] in code_length.", "filename": "TNGHalo", "size": "1012 MB", - "url": "http://yt-project.org/data/TNGHalo.tar.gz" + "url": "https://yt-project.org/data/TNGHalo.tar.gz" } ], "art frontend": [ @@ -21,14 +21,14 @@ "description": "Hydro cosmological zoom-in simulation of a dwarf galaxy. NMSU-ART Dataset.", "filename": "D9p_500", "size": "343 MB", - "url": "http://yt-project.org/data/D9p_500.tar.gz" + "url": "https://yt-project.org/data/D9p_500.tar.gz" }, { "code": "NMSU-ART", "description": "Dark Matter only cosmological NMSU-ART Dataset.", "filename": "DMonly", "size": "1 GB", - "url": "http://yt-project.org/data/DMonly.tar.gz" + "url": "https://yt-project.org/data/DMonly.tar.gz" } ], "artio frontend": [ @@ -37,7 +37,79 @@ "description": "Isolated galaxy with particles and gas.", "filename": "sizmbhloz-clref04SNth-rs9_a0.9011", "size": "93 MB", - "url": "http://yt-project.org/data/sizmbhloz-clref04SNth-rs9_a0.9011.tar.gz" + "url": "https://yt-project.org/data/sizmbhloz-clref04SNth-rs9_a0.9011.tar.gz" + } + ], + "amrvac frontend": [ + { + "code": "MPI-AMRVAC", + "description": "MHD Jet cloud run (2.5D). Unzips to 8.2MB", + "filename": "mhd_jet", + "size": "6.1MB", + "url": "https://yt-project.org/data/mhd_jet.tar.gz" + }, + { + "code": "MPI-AMRVAC", + "description": "2D polar blast wave run. Unzips to 518KB", + "filename": "bw_polar_2d", + "size": "457KB", + "url": "https://yt-project.org/data/bw_polar_2d.tar.gz" + }, + { + "code": "MPI-AMRVAC", + "description": "2D spherical blast wave run. Unzips to 771KB", + "filename": "bw_spherical_2d", + "size": "703KB", + "url": "https://yt-project.org/data/bw_spherical_2d.tar.gz" + }, + { + "code": "MPI-AMRVAC", + "description": "3D cartesian blast wave run. Unzips to 3.8MB", + "filename": "bw_cartesian_3d", + "size": "2.5MB", + "url": "https://yt-project.org/data/bw_cartesian_3d.tar.gz" + }, + { + "code": "MPI-AMRVAC", + "description": "3D cylindrical blast wave run. Unzips to 16MB", + "filename": "bw_cylindrical_3d", + "size": "7.3MB", + "url": "https://yt-project.org/data/bw_cylindrical_3d.tar.gz" + }, + { + "code": "MPI-AMRVAC", + "description": "3D cartesian kelvin-helmoltz run. Unzips to 16MB", + "filename": "kh3d", + "size": "13MB", + "url": "https://yt-project.org/data/kh3d.tar.gz" + }, + { + "code": "MPI-AMRVAC", + "description": "2D cartesian kelvin-helmoltz run. Unzips to 598KB", + "filename": "kh2d", + "size": "488KB", + "url": "https://yt-project.org/data/kh2d.tar.gz" + }, + { + "code": "MPI-AMRVAC", + "description": "Reimann 1.75D run. Unzips to 52KB", + "filename": "riemann1d", + "size": "28KB", + "url": "https://yt-project.org/data/riemann1d.tar.gz" + }, + { + "code": "MPI-AMRVAC", + "description": "Richtmyer-Meshkov instability 2D run. Parfile included. Unzips to 472KB", + "filename": "rmi_dust_2d", + "size": "159KB", + "url": "https://yt-project.org/data/rmi_dust_2d.tar.gz" + }, + { + "code": "MPI-AMRVAC", + "description": "A 2.5D MHD simulation of the solar atmosphere. Unzips to 456MB", + "filename": "solarprom2d", + "size": "416MB", + "url": "https://yt-project.org/data/solarprom2d.tar.gz" } ], "athena frontend": [ @@ -46,28 +118,28 @@ "description": "Gas sloshing with MHD, with static mesh refinement. \"time_unit\":(1.0,\"Myr\"), \"length_unit\":(1.0,\"Mpc\"), \"mass_unit\":(1.0e14,\"Msun\")", "filename": "MHDSloshing", "size": "1.5 GB", - "url": "http://yt-project.org/data/MHDSloshing.tar.gz" + "url": "https://yt-project.org/data/MHDSloshing.tar.gz" }, { "code": "Athena", "description": "Time series data of a MHD blast simulation.", "filename": "MHDBlast", "size": "283 MB", - "url": "http://yt-project.org/data/MHDBlast.tar.gz" + "url": "https://yt-project.org/data/MHDBlast.tar.gz" }, { "code": "Athena", "description": "HD simulation of a ram pressure-stripped galaxy, from Stephanie Tonnesen. \"time_unit\":3.086e14, \"length_unit\":8.0236e22, \"mass_unit\":5.1649293e+39", "filename": "RamPressureStripping", "size": "2.1 GB", - "url": "http://yt-project.org/data/RamPressureStripping.tar.gz" + "url": "https://yt-project.org/data/RamPressureStripping.tar.gz" }, { "code": "Athena", "description": "Hydro simulation of shock interacting with a cloud, with static mesh refinement.", "filename": "ShockCloud", "size": "104 MB", - "url": "http://yt-project.org/data/ShockCloud.tar.gz" + "url": "https://yt-project.org/data/ShockCloud.tar.gz" } ], "athena++ frontend": [ @@ -76,14 +148,14 @@ "description": "MHD simulation of gas sloshing with adaptive mesh refinement.", "filename": "AM06", "size": "1.2 GB", - "url": "http://yt-project.org/data/AM06.tar.gz" + "url": "https://yt-project.org/data/AM06.tar.gz" }, { "code": "Athena++", "description": "Hydro simulation of a Keplerian disk in spherical geometry with logarithmic radial coordinates.", "filename": "KeplerianDisk", "size": "157 kB", - "url": "http://yt-project.org/data/KeplerianDisk.tar.gz" + "url": "https://yt-project.org/data/KeplerianDisk.tar.gz" } ], "boxlib frontend": [ @@ -92,112 +164,119 @@ "description": "Sod problem, 1-d dataset, 3 levels", "filename": "castro_sod_x_plt00036", "size": "9.9 kB", - "url": "http://yt-project.org/data/castro_sod_x_plt00036.tar.gz" + "url": "https://yt-project.org/data/castro_sod_x_plt00036.tar.gz" }, { "code": "Castro", "description": "Sedov problem, 2-d dataset, 4 levels", "filename": "castro_sedov_2d_cyl_in_cart_plt00150", "size": "4.6 MB", - "url": "http://yt-project.org/data/castro_sedov_2d_cyl_in_cart_plt00150.tar.gz" + "url": "https://yt-project.org/data/castro_sedov_2d_cyl_in_cart_plt00150.tar.gz" }, { "code": "Castro", "description": "3 levels, 2-d dataset, contains particles", "filename": "RT_particles.tar.gz", "size": "232 kb", - "url": "http://yt-project.org/data/RT_particles.tar.gz" + "url": "https://yt-project.org/data/RT_particles.tar.gz" }, { "code": "Maestro", "description": "sub-chandra problem, 3-d dataset, spherical base state, 2 levels", "filename": "maestro_subCh_plt00248", "size": "474 MB", - "url": "http://yt-project.org/data/maestro_subCh_plt00248.tar.gz" + "url": "https://yt-project.org/data/maestro_subCh_plt00248.tar.gz" }, { "code": "Castro", "description": "AMR 1-d Sedov-taylor blast in spherical geometry.", "filename": "sedov_1d_sph_plt00120", "size": "17 kb", - "url": "http://yt-project.org/data/sedov_1d_sph_plt00120.tar.gz" + "url": "https://yt-project.org/data/sedov_1d_sph_plt00120.tar.gz" }, { "code": "Maestro", "description": "X-ray burst problem, 3-d dataset, plane-parallel base state, 1 level, non-cubic domain", "filename": "maestro_xrb_lores_23437", "size": "1.8 GB", - "url": "http://yt-project.org/data/maestro_xrb_lores_23437.tar.gz" + "url": "https://yt-project.org/data/maestro_xrb_lores_23437.tar.gz" + }, + { + "code": "Nyx", + "description": "Tiny Nyx dataset", + "filename": "nyx_small", + "size": "0.1 MB", + "url": "https://yt-project.org/data/nyx_small.tar.gz" }, - { - "code": "Nyx", - "description": "Tiny Nyx dataset", - "filename": "nyx_small", - "size": "0.1 MB", - "url": "http://yt-project.org/data/nyx_small.tar.gz" - }, { "code": "Nyx", "description": "Example Nyx dataset", "filename": "Nyx_LyA", "size": "5.1 MB", - "url": "http://yt-project.org/data/Nyx_LyA.tar.gz" + "url": "https://yt-project.org/data/Nyx_LyA.tar.gz" }, { "code": "Nyx", "description": "Nyx pure hydro (no particles) dataset", "filename": "nyx_sedov_plt00086", "size": "3.6 MB", - "url": "http://yt-project.org/data/nyx_sedov_plt00086.tgz" + "url": "https://yt-project.org/data/nyx_sedov_plt00086.tgz" }, { "code": "Orion", "description": "Non-Cubic Domain", "filename": "RadTube", "size": "12 MB", - "url": "http://yt-project.org/data/RadTube.tar.gz" + "url": "https://yt-project.org/data/RadTube.tar.gz" }, { "code": "Orion", "description": "Non-Cubic Domain", "filename": "RadAdvect", "size": "12 MB", - "url": "http://yt-project.org/data/RadAdvect.tar.gz" + "url": "https://yt-project.org/data/RadAdvect.tar.gz" }, { "code": "Orion", "description": "An Orion dataset with star particles", "filename": "StarParticles", "size": "12 MB", - "url": "http://yt-project.org/data/StarParticles.tar.gz" + "url": "https://yt-project.org/data/StarParticles.tar.gz" }, { "code": "WarpX", "description": "A WarpX dataset with only one particle species", "filename": "LangmuirWave", "size": "41 MB", - "url": "http://yt-project.org/data/LangmuirWave_v2.tar.gz" + "url": "https://yt-project.org/data/LangmuirWave_v2.tar.gz" }, { "code": "WarpX", "description": "A WarpX dataset with two particle species", "filename": "PlasmaAcceleration", "size": "6.4 MB", - "url": "http://yt-project.org/data/PlasmaAcceleration_v2.tar.gz" + "url": "https://yt-project.org/data/PlasmaAcceleration_v2.tar.gz" }, { "code": "WarpX", "description": "A WarpX dataset with node-centered fields", "filename": "Laser", "size": "1.7 MB", - "url": "http://yt-project.org/data/Laser.tar.gz" + "url": "https://yt-project.org/data/Laser.tar.gz" }, { "code": "WarpX", "description": "A WarpX dataset with mesh refinement", "filename": "GaussianBeam", "size": "6.2 MB", - "url": "http://yt-project.org/data/GaussianBeam.tar.gz" + "url": "https://yt-project.org/data/GaussianBeam.tar.gz" + }, + { + "code": "AMReX", + "description": "An AMRex particle dataset", + "filename": "ParticleCavity", + "size": "692KB", + "url": "https://yt-project.org/data/ParticleCavity.tar.gz" } ], "cf radial frontend": [ @@ -206,7 +285,7 @@ "description": "A Cartesian 3D Gridded Cf/Radial RADAR dataset", "filename": "CfRadialGrid", "size": "20 MB", - "url": "http://yt-project.org/data/CfRadialGrid.tar.gz" + "url": "https://yt-project.org/data/CfRadialGrid.tar.gz" } ], "chombo frontend": [ @@ -215,35 +294,35 @@ "description": "Turbulent Box (CGS units)", "filename": "TurbBoxLowRes", "size": "89 MB", - "url": "http://yt-project.org/data/TurbBoxLowRes.tar.gz" + "url": "https://yt-project.org/data/TurbBoxLowRes.tar.gz" }, { "code": "Chombo", "description": "A small, two-dimensional generic Chombo dataset that contains particles.", "filename": "ZeldovichPancake", "size": "308 kB", - "url": "http://yt-project.org/data/ZeldovichPancake.tar.gz" + "url": "https://yt-project.org/data/ZeldovichPancake.tar.gz" }, { "code": "Orion 2", "description": "Refine-ratio of 4", "filename": "GaussianCloud", "size": "122 MB", - "url": "http://yt-project.org/data/GaussianCloud.tar.gz" + "url": "https://yt-project.org/data/GaussianCloud.tar.gz" }, { "code": "pluto", "description": "2D Kelvin-Helmholtz Instability", "filename": "KelvinHelmholtz", "size": "4.2 MB", - "url": "http://yt-project.org/data/KelvinHelmholtz.tar.gz" + "url": "https://yt-project.org/data/KelvinHelmholtz.tar.gz" }, { "code": "Orion 2", "description": "An Orion 2 dataset with sink particles", "filename": "IsothermalSphere", "size": "122 MB", - "url": "http://yt-project.org/data/IsothermalSphere.tar.gz" + "url": "https://yt-project.org/data/IsothermalSphere.tar.gz" } ], "enzo frontend": [ @@ -252,107 +331,121 @@ "description": "Enzo simulation, cosmology, 32^3 root grid, 5 levels AMR, star formation, 32 Mpc/h on a side, 57 datasets, 680 MB total.", "filename": "enzo_tiny_cosmology", "size": "419 MB", - "url": "http://yt-project.org/data/enzo_tiny_cosmology.tar.gz" + "url": "https://yt-project.org/data/enzo_tiny_cosmology.tar.gz" }, { "code": "Enzo", "description": "Enzo simulation, cosmology, identical dimensions as the enzo_tiny_cosmology dataset, but with additional physics: primordial chemistry, metal cooling, and UV background. 57 datasets, 1 GB total.", "filename": "enzo_cosmology_plus", "size": "779 MB", - "url": "http://yt-project.org/data/enzo_cosmology_plus.tar.gz" + "url": "https://yt-project.org/data/enzo_cosmology_plus.tar.gz" }, { "code": "Enzo", "description": "Enzo dataset, cosmology, 64^3 root grid, 5 levels AMR, star formation 128 Mpc/h on a side, 4GB total.", "filename": "Enzo_64", "size": "2.4 GB", - "url": "http://yt-project.org/data/Enzo_64.tar.gz" + "url": "https://yt-project.org/data/Enzo_64.tar.gz" }, { "code": "Enzo", "description": "An isolated galaxy dataset.", "filename": "IsolatedGalaxy", "size": "292 MB", - "url": "http://yt-project.org/data/IsolatedGalaxy.tar.gz" + "url": "https://yt-project.org/data/IsolatedGalaxy.tar.gz" }, { "code": "Enzo", "description": "Same as the IsolatedGalaxy dataset, but with the gravitational potential field added.", "filename": "IsolatedGalaxy_Gravity", "size": "177 MB", - "url": "http://yt-project.org/data/IsolatedGalaxy_Gravity.tar.gz" + "url": "https://yt-project.org/data/IsolatedGalaxy_Gravity.tar.gz" }, { "code": "Enzo", "description": "A high resolution isolated galaxy dataset. The center of the galaxy is at [0.53, 0.53, 0.53].", "filename": "HiresIsolatedGalaxy", "size": "2.9 GB", - "url": "http://yt-project.org/data/HiresIsolatedGalaxy.tar.gz" + "url": "https://yt-project.org/data/HiresIsolatedGalaxy.tar.gz" }, { "code": "Enzo", "description": "Deeply nested Enzo dataset with 40 levels of AMR", "filename": "DeeplyNestedZoom", "size": "1.5 GB", - "url": "http://yt-project.org/data/DeeplyNestedZoom.tar.gz" + "url": "https://yt-project.org/data/DeeplyNestedZoom.tar.gz" }, { "code": "Enzo", "description": "MHDCT time series, includes face-centered fields", "filename": "MHDCTOrszagTang", "size": "170 kB", - "url": "http://yt-project.org/data/MHDCTOrszagTang.tar.gz" + "url": "https://yt-project.org/data/MHDCTOrszagTang.tar.gz" }, { "code": "Enzo", "description": "Enzo 3.0 dataset including CenOstriker active particles as well as dark matter particles", "filename": "ActiveParticleCosmology", "size": "73 MB", - "url": "http://yt-project.org/data/ActiveParticleCosmology.tar.gz" + "url": "https://yt-project.org/data/ActiveParticleCosmology.tar.gz" }, { "code": "Enzo", "description": "Enzo 3.0 time series dataset that tracks the formation of two AccretingParticle active particles", "filename": "ActiveParticleTwoSphere", "size": "22 MB", - "url": "http://yt-project.org/data/ActiveParticleTwoSphere.tar.gz" + "url": "https://yt-project.org/data/ActiveParticleTwoSphere.tar.gz" }, { "code": "Enzo", "description": "1D Toro Shock Tube", "filename": "ToroShockTube", "size": "10 kB", - "url": "http://yt-project.org/data/ToroShockTube.tar.gz" + "url": "https://yt-project.org/data/ToroShockTube.tar.gz" }, { "code": "Enzo", "description": "2D Kelvin-Helmholtz test", "filename": "EnzoKelvinHelmholtz", "size": "4.3 MB", - "url": "http://yt-project.org/data/EnzoKelvinHelmholtz.tar.gz" + "url": "https://yt-project.org/data/EnzoKelvinHelmholtz.tar.gz" }, { "code": "Enzo", "description": "A high redshift cosmological simulation with non-zero Omega_radiation cosmology.", "filename": "PopIII_mini", "size": "290 MB", - "url": "http://yt-project.org/data/PopIII_mini.tar.gz" + "url": "https://yt-project.org/data/PopIII_mini.tar.gz" + }, + { + "code": "Enzo", + "description": "A cosmological simulation using SmartStar active particles with array-like particle fields.", + "filename": "SmartStars", + "size": "1.2 GB", + "url": "https://yt-project.org/data/SmartStars.tar.gz" } ], - "enzo_p frontend": [ + "enzo_e frontend": [ { - "code": "Enzo-P", + "code": "Enzo-E", "description": "A dataset from a 2D simulation of a high-pressure region shaped like the word \"Hi\".", "filename": "hello-0210", "size": "31 MB", - "url": "http://yt-project.org/data/hello-0210.tar.gz" + "url": "https://yt-project.org/data/hello-0210.tar.gz" }, { - "code": "Enzo-P", + "code": "Enzo-E", "description": "A cosmological dataset of a 3 Mpc/h comoving box with 64^3 grid cells and dark matter particles.", "filename": "ENZOP_DD0140", "size": "208 MB", - "url": "http://yt-project.org/data/ENZOP_DD0140.tar.gz" + "url": "https://yt-project.org/data/ENZOP_DD0140.tar.gz" + }, + { + "code": "Enzo-E", + "description": "A dataset from a 3D MHD simulation of an Orszag-Tang Vortex.", + "filename": "ENZOE_orszag-tang_0.5", + "size": "25 MB", + "url": "https://yt-project.org/data/ENZOE_orszag-tang_0.5.tar.gz" } ], "exodus_ii frontend": [ @@ -361,42 +454,42 @@ "description": "A selection of MOOSE simulation outputs using a variety of element types.", "filename": "MOOSE_sample_data", "size": "536 MB", - "url": "http://yt-project.org/data/MOOSE_Sample_data.tar.gz" + "url": "https://yt-project.org/data/MOOSE_Sample_data.tar.gz" }, { "code": "MOOSE", "description": "A MOOSE simulation with data on second order triangular elements.", "filename": "SecondOrderTris", "size": "79 kB", - "url": "http://yt-project.org/data/SecondOrderTris.tar.gz" + "url": "https://yt-project.org/data/SecondOrderTris.tar.gz" }, { "code": "MOOSE", "description": "MOOSE simulation with data on second order tetrahedral elements.", "filename": "SecondOrderTets", "size": "124 kB", - "url": "http://yt-project.org/data/SecondOrderTets.tar.gz" + "url": "https://yt-project.org/data/SecondOrderTets.tar.gz" }, { "code": "MOOSE", "description": "MOOSE simulation with data on second order quadrilateral elements.", "filename": "SecondOrderQuads", "size": "166 kB", - "url": "http://yt-project.org/data/SecondOrderQuads.tar.gz" + "url": "https://yt-project.org/data/SecondOrderQuads.tar.gz" }, { "code": "MOOSE", "description": "A selection of MOOSE datasets used for testing.", "filename": "ExodusII_tests", "size": "723 kB", - "url": "http://yt-project.org/data/ExodusII_tests.tar.gz" + "url": "https://yt-project.org/data/ExodusII_tests.tar.gz" }, { "code": "MOOSE", "description": "MOOSE example data for visualizing a single variable on multiple mesh blocks.", "filename": "MultiRegion", "size": "5.3 kB", - "url": "http://yt-project.org/data/MultiRegion.tar.gz" + "url": "https://yt-project.org/data/MultiRegion.tar.gz" } ], "fits frontend": [ @@ -405,28 +498,28 @@ "description": "A FITS 3D cube of radio data from the BU Galactic Ring Survey.", "filename": "grs-50-cube.fits.gz", "size": "171 MB", - "url": "http://yt-project.org/data/grs-50-cube.fits.gz" + "url": "https://yt-project.org/data/grs-50-cube.fits.gz" }, { "code": "FITS", "description": "A FITS 3D cube of VLA radio data of M33, provided by Adam Leroy of NRAO. This version has been compressed along the spectral axis.", "filename": "m33_hi.fits.gz", "size": "174 MB", - "url": "http://yt-project.org/data/m33_hi.fits.gz" + "url": "https://yt-project.org/data/m33_hi.fits.gz" }, { "code": "FITS", "description": "Two X-ray images provided by Scott Randall, used in Blanton, E.L., Randall, S.W., Clarke, T.E., et al. 2011, ApJ, 737, 99.", "filename": "A2052", "size": "507 kB", - "url": "http://yt-project.org/data/A2052.tar.gz" + "url": "https://yt-project.org/data/A2052.tar.gz" }, { "code": "FITS", "description": "An events file from a Chandra observation of the Bullet Cluster downloaded from the Chandra Data Archive, OBS ID 5356.", "filename": "acisf05356N003_evt2.fits.gz", "size": "15 MB", - "url": "http://yt-project.org/data/acisf05356N003_evt2.fits.gz" + "url": "https://yt-project.org/data/acisf05356N003_evt2.fits.gz" } ], "flash frontend": [ @@ -435,77 +528,77 @@ "description": "Sedov3D test", "filename": "Sedov3D", "size": "38 MB", - "url": "http://yt-project.org/data/Sedov3D.tar.gz" + "url": "https://yt-project.org/data/Sedov3D.tar.gz" }, { "code": "FLASH", "description": "Two timesteps of gas sloshing around", "filename": "GasSloshing", "size": "330 MB", - "url": "http://yt-project.org/data/GasSloshing.tar.gz" + "url": "https://yt-project.org/data/GasSloshing.tar.gz" }, { "code": "FLASH", "description": "Many timesteps of (low-res) gas sloshing around", "filename": "GasSloshingLowRes", "size": "1 GB", - "url": "http://yt-project.org/data/GasSloshingLowRes.tar.gz" + "url": "https://yt-project.org/data/GasSloshingLowRes.tar.gz" }, { "code": "FLASH", "description": "Wind tunnel test problem", "filename": "WindTunnel", "size": "74 MB", - "url": "http://yt-project.org/data/WindTunnel.tar.gz" + "url": "https://yt-project.org/data/WindTunnel.tar.gz" }, { "code": "FLASH", "description": "The two-body problem with no gas fields", "filename": "Orbit", "size": "6.6 MB", - "url": "http://yt-project.org/data/Orbit.tar.gz" + "url": "https://yt-project.org/data/Orbit.tar.gz" }, { "code": "FLASH", "description": "A merger of two galaxy clusters", "filename": "GalaxyClusterMerger", "size": "4.0 GB", - "url": "http://yt-project.org/data/GalaxyClusterMerger.tar.gz" + "url": "https://yt-project.org/data/GalaxyClusterMerger.tar.gz" }, { "code": "FLASH", "description": "Magnetized white dwarf binary merger in 2-D cylindrical coordinates, produced by Fisher Computational Astrophysics Group and used in S. Ji et al., 2013, ApJ, 773, 136", "filename": "WDMerger_hdf5_chk_1000", "size": "59 MB", - "url": "http://yt-project.org/data/WDMerger_hdf5_chk_1000.tar.gz" + "url": "https://yt-project.org/data/WDMerger_hdf5_chk_1000.tar.gz" }, { "code": "FLASH", "description": "MHD simulation in 3-D cylindrical coordinates", "filename": "MHD_Cyl3d_hdf5_plt_cnt_0100", "size": "44 MB", - "url": "http://yt-project.org/data/MHD_Cyl3d_hdf5_plt_cnt_0100.tar.gz" + "url": "https://yt-project.org/data/MHD_Cyl3d_hdf5_plt_cnt_0100.tar.gz" }, { "code": "FLASH", "description": "A dark matter particle-only dataset of two galaxy clusters merging", "filename": "fiducial_1to3_b1", "size": "555 MB", - "url": "http://yt-project.org/data/fiducial_1to3_b1.tar.gz" + "url": "https://yt-project.org/data/fiducial_1to3_b1.tar.gz" }, { "code": "FLASH", "description": "A short time seires containg particle files and plot files of two galaxy clusters merging", "filename": "fiducial_1to1_b0", "size": "4.8 GB", - "url": "http://yt-project.org/data/fiducial_1to1_b0.tar.gz" + "url": "https://yt-project.org/data/fiducial_1to1_b0.tar.gz" }, { "code": "FLASH", "description": "An example FLASH 2.5 dataset", "filename": "DensTurbMag", "size": "1.6 MB", - "url": "http://yt-project.org/data/DensTurbMag.tar.gz" + "url": "https://yt-project.org/data/DensTurbMag.tar.gz" } ], "gamer frontend": [ @@ -514,28 +607,42 @@ "description": "Interacting AGN jets", "filename": "InteractingJets", "size": "72 MB", - "url": "http://yt-project.org/data/InteractingJets.tar.gz" + "url": "https://yt-project.org/data/InteractingJets.tar.gz" }, { "code": "GAMER", "description": "Merger of multiple wave dark matter solitons", "filename": "WaveDarkMatter", "size": "333 MB", - "url": "http://yt-project.org/data/WaveDarkMatter.tar.gz" + "url": "https://yt-project.org/data/WaveDarkMatter.tar.gz" }, { "code": "GAMER", "description": "Galaxy cluster merger simulation with a large number of grid objects", "filename": "ClusterMerger", "size": "3.3 GB", - "url": "http://yt-project.org/data/ClusterMerger.tar.gz" + "url": "https://yt-project.org/data/ClusterMerger.tar.gz" }, { "code": "GAMER", "description": "Plummer model with both gas and particles", "filename": "Plummer", "size": "23 MB", - "url": "http://yt-project.org/data/Plummer.tar.gz" + "url": "https://yt-project.org/data/Plummer.tar.gz" + }, + { + "code": "GAMER", + "description": "MHD Orszag-Tang Vortex Simulation", + "filename": "MHDOrszagTangVortex", + "size": "8.7 MB", + "url": "https://yt-project.org/data/MHDOrszagTangVortex.tar.gz" + }, + { + "code": "GAMER", + "description": "Special relativistic hydrodynamics simulation of a jet hitting an interface between two fluids", + "filename": "JetICMWall", + "size": "2.3 GB", + "url": "https://yt-project.org/data/JetICMWall.tar.gz" } ], "gdf frontend": [ @@ -544,60 +651,72 @@ "description": "Toy model for clump finder tests", "filename": "GDFClumps", "size": "96 kB", - "url": "http://yt-project.org/data/GDFClumps.tar.gz" + "url": "https://yt-project.org/data/GDFClumps.tar.gz" }, { "code": "Piernik", "description": "Sedov explosion with multiple levels of refinement", "filename": "sedov_tst_0004", "size": "11 MB", - "url": "http://yt-project.org/data/sedov_tst_0004.tar.gz" + "url": "https://yt-project.org/data/sedov_tst_0004.tar.gz" } ], - "halo_catalog frontends": [ + "halo catalog frontends": [ + { + "code": "AdaptaHOP", + "description": "Halo catalog for cosmological zoom output_00080 (see below). Unzips to 5.4 MB", + "filename": "output_00080_halos", + "size": "5 MB", + "url": "https://yt-project.org/data/output_00080_halos.tar.gz" + }, + { + "code": "AdaptaHOP", + "description": "Halo catalog for cosmological zoom output_00080 (see below). Unzips to 17 KB", + "filename": "output_00080_new_halos", + "size": "17 KB", + "url": "https://yt-project.org/data/output_00080_new_halos.tar.gz" + }, { "code": "AHF", "description": "Halos found using AHF (AMIGA Halo Finder) for dataset gizmo_64", "filename": "ahf_halos", "size": "59 MB", - "url": "http://yt-project.org/data/ahf_halos.tar.gz" + "url": "https://yt-project.org/data/ahf_halos.tar.gz" }, { "code": "Gadget FOF", "description": "300 halo catalogs with halo member IDs made using inline FOF/SUBFIND in a Gadget N-body simulation. Can be used for experimenting with merger trees.", "filename": "gadget_halos", "size": "216 MB", - "url": "http://yt-project.org/data/gadget_halos.tar.gz" + "url": "https://yt-project.org/data/gadget_halos.tar.gz" }, { "code": "Gadget FOF", "description": "Two halo catalogs made using inline FOF/SUBFIND in a Gadget N-body simulation", "filename": "gadget_fof_halos", "size": "412 kB", - "url": "http://yt-project.org/data/gadget_fof_halos.tar.gz" + "url": "https://yt-project.org/data/gadget_fof_halos.tar.gz" }, { "code": "OWLS Subfind", "description": "Two halo catalogs made using inline FOF in an OWLS N-body simulation", "filename": "owls_fof_halos", "size": "1.6 MB", - "url": "http://yt-project.org/data/owls_fof_halos.tar.gz" + "url": "https://yt-project.org/data/owls_fof_halos.tar.gz" }, { "code": "Rockstar", "description": "Halos found using rockstar halo finder for dataset Enzo_64", "filename": "rockstar_halos", "size": "130 kB", - "url": "http://yt-project.org/data/rockstar_halos.tar.gz" - } - ], - "ytree frontend": [ + "url": "https://yt-project.org/data/rockstar_halos.tar.gz" + }, { - "code": "ytree", - "description": "A small merger tree created using the Rockstar halo finder and consistent-trees merger tree code, then converted to the ytree format.", - "filename": "arbor", - "size": "5 MB", - "url": "http://yt-project.org/data/arbor.tar.gz" + "code": "yt FoF", + "description": "47 halo catalogs with particle IDs made from the enzo_tiny_cosmology data with yt FoF", + "filename": "tiny_fof_halos", + "side": "1.4 MB", + "url": "https://yt-project.org/data/tiny_fof_halos.tar.gz" } ], "moab frontend": [ @@ -606,37 +725,53 @@ "description": "Cantor Set. MoabHex8 dataset (63^3)", "filename": "c5", "size": "24 MB", - "url": "http://yt-project.org/data/c5.tar.gz" + "url": "https://yt-project.org/data/c5.tar.gz" }, { "code": "Moab", "description": "fng_usrbin22.h5m: sample mcnp mesh data & mcnp_n_impr_fluka.h5m: faceted geometric model.", "filename": "MoabTest", "size": "168 MB", - "url": "http://yt-project.org/data/MoabTest.tar.gz" + "url": "https://yt-project.org/data/MoabTest.tar.gz" } ], + "nc4_cm1 frontend": [ + { + "code": "cm1", + "description": "nc4_cm1_lofs_tornado_test.nc: low elevation tornado simulation, cartesian data, run with cm1r19 lofs", + "filename": "cm1_tornado_lofs", + "size": "4.4 MB", + "url": "https://yt-project.org/data/cm1_tornado_lofs.tar.gz" + }, + { + "code": "cm1", + "description": "cm1out_000009.nc and cm1out.nc: 2km resolution supercell generated with cm1r19.10", + "filename": "cm1_supercell_native", + "size": "40 MB", + "url": "https://yt-project.org/data/cm1_supercell_native.tar.gz" + } + ], "other datasets": [ { "code": "Generic", "description": "Two datasets of uniformly gridded fields in HDF5 and one in a FITS file.", "filename": "UnigridData", "size": "1.6 GB", - "url": "http://yt-project.org/data/UnigridData.tar.gz" + "url": "https://yt-project.org/data/UnigridData.tar.gz" }, { "code": "Various", "description": "All the datasets used in the yt answer testing suite.", "filename": "test_outputs", "size": "534 MB", - "url": "http://yt-project.org/data/test_outputs.tar.gz" + "url": "https://yt-project.org/data/test_outputs.tar.gz" }, { "code": "Generic", "description": "This dataset is from the NASA Global Modeling and Assimilation Office. It is a snapshot from 0900 on August 22, 2018.", "filename": "geos", "size": "2.1 GB", - "url": "http://yt-project.org/data/geos.tar.gz" + "url": "https://yt-project.org/data/geos.tar.gz" } ], "ramses frontend": [ @@ -645,92 +780,92 @@ "description": "Cosmological zoom simulation with gas, DM and stars.Unzips to 366 MB ", "filename": "output_00080", "size": "250 MB", - "url": "http://yt-project.org/data/output_00080.tar.gz" + "url": "https://yt-project.org/data/output_00080.tar.gz" }, { "code": "RAMSES", "description": "Non cosmological isolated galaxy disk dataset containing gas and particles, set up with boxlen != 1. Generated using the DICE code", "filename": "DICEGalaxyDisk_nonCosmological", "size": "415 MB", - "url": "http://yt-project.org/data/DICEGalaxyDisk_nonCosmological.tar.gz" + "url": "https://yt-project.org/data/DICEGalaxyDisk_nonCosmological.tar.gz" }, { "code": "RAMSES", "description": "Isolated galaxy disk dataset containing gas and particles, set up with boxlen != 1. Generated using the DICE code. Unzips to 663 MB.", "filename": "DICEGalaxyDisk", "size": "79 MB", - "url": "http://yt-project.org/data/DICEGalaxyDisk.tar.gz" + "url": "https://yt-project.org/data/DICEGalaxyDisk.tar.gz" }, { "code": "RAMSES", "description": "MHD dataset, 128^3. Unzips to 316 MB.", "filename": "ramses_mhd_128", "size": "7.3 MB", - "url": "http://yt-project.org/data/ramses_mhd_128.tar.gz" + "url": "https://yt-project.org/data/ramses_mhd_128.tar.gz" }, { "code": "RAMSES", "description": "MHD dataset, 32^3 base grid, 3 levels of AMR. Unzips to 457 MB.", "filename": "ramses_mhd_amr", "size": "10 MB", - "url": "http://yt-project.org/data/ramses_mhd_amr.tar.gz" + "url": "https://yt-project.org/data/ramses_mhd_amr.tar.gz" }, { "code": "RAMSES-RT", "description": "Dataset containing RT fields", "filename": "ramses_rt_00088", "size": "617 MB", - "url": "http://yt-project.org/data/ramses_rt_00088.tar.gz" + "url": "https://yt-project.org/data/ramses_rt_00088.tar.gz" }, { "code": "RAMSES", "description": "DM only cosmology output, unzips to 813 MB", "filename": "output_00101", "size": "400 MB", - "url": "http://yt-project.org/data/output_00101.tar.gz" - }, - { - "code": "RAMSES", - "description": "DM + hydro run, unzips to 1.1G with extra particle fields (temperature + family)", - "filename": "ramses_extra_fields", - "size": "220 MB", - "url": "http://yt-project.org/data/ramses_extra_fields.tar.gz" - }, - { - "code": "RAMSES", - "description": "Hydro run, unzips to 26MB with extra particle fields (temperature + family)", - "filename": "ramses_extra_fields_small", - "size": "15 MB", - "url": "http://yt-project.org/data/ramses_extra_fields_small.tar.gz" - }, - { - "code": "RAMSES", - "description": "Hydro run with stars and black holes (sink).", - "filename": "ramses_sink_00016", - "size": "3.9 MB", - "url": "http://yt-project.org/data/ramses_sink_00016.tar.gz" - }, - { - "code": "RAMSES", - "description": "RAMSES run with particle output format from version > stable_17_09.", - "filename": "ramses_new_format", - "size": "4.4 MB", - "url": "http://yt-project.org/data/ramses_new_format.tar.gz" - }, - { - "code": "RAMSES", - "description": "RAMSES run with star formation and sinks.", - "filename": "ramses_star_formation", - "size": "231 MB", - "url": "http://yt-project.org/data/ramses_star_formation.tar.gz" - }, - { - "code": "RAMSES", - "description": "Isolated galaxy with empty records (mass_sph). Unzips to 330M.", - "filename": "ramses_empty_record", - "size": "164 MB", - "url": "http://yt-project.org/data/ramses_empty_record.tar.gz" - } + "url": "https://yt-project.org/data/output_00101.tar.gz" + }, + { + "code": "RAMSES", + "description": "DM + hydro run, unzips to 1.1G with extra particle fields (temperature + family)", + "filename": "ramses_extra_fields", + "size": "220 MB", + "url": "https://yt-project.org/data/ramses_extra_fields.tar.gz" + }, + { + "code": "RAMSES", + "description": "Hydro run, unzips to 26MB with extra particle fields (temperature + family)", + "filename": "ramses_extra_fields_small", + "size": "15 MB", + "url": "https://yt-project.org/data/ramses_extra_fields_small.tar.gz" + }, + { + "code": "RAMSES", + "description": "Hydro run with stars and black holes (sink).", + "filename": "ramses_sink_00016", + "size": "3.9 MB", + "url": "https://yt-project.org/data/ramses_sink_00016.tar.gz" + }, + { + "code": "RAMSES", + "description": "RAMSES run with particle output format from version > stable_17_09.", + "filename": "ramses_new_format", + "size": "4.4 MB", + "url": "https://yt-project.org/data/ramses_new_format.tar.gz" + }, + { + "code": "RAMSES", + "description": "RAMSES run with star formation and sinks.", + "filename": "ramses_star_formation", + "size": "231 MB", + "url": "https://yt-project.org/data/ramses_star_formation.tar.gz" + }, + { + "code": "RAMSES", + "description": "Isolated galaxy with empty records (mass_sph). Unzips to 330M.", + "filename": "ramses_empty_record", + "size": "164 MB", + "url": "https://yt-project.org/data/ramses_empty_record.tar.gz" + } ], "openPMD frontend": [ { @@ -738,14 +873,14 @@ "description": "2D test dataset", "filename": "example-2d", "size": "12 MB", - "url": "http://yt-project.org/data/example-2d.tar.gz" + "url": "https://yt-project.org/data/example-2d.tar.gz" }, { "code": "openPMD", "description": "3D test dataset", "filename": "example-3d", "size": "13 MB", - "url": "http://yt-project.org/data/example-3d.tar.gz" + "url": "https://yt-project.org/data/example-3d.tar.gz" } ], "simulationio frontend": [ @@ -754,7 +889,7 @@ "description": "Two data sets containing initial data for a single neutron star and one data set containing a binary black hole system mid in-spiral.", "filename": "CompactObjects", "size": "1.9 GB", - "url": "http://yt-project.org/data/CompactObjects.tar.gz" + "url": "https://yt-project.org/data/CompactObjects.tar.gz" } ], "sph frontend": [ @@ -763,147 +898,154 @@ "description": "Gadget HDF5 snapshot (Eagle) dataset with 2*188^3 particles, including Gas and DM.", "filename": "snapshot_028_z000p000", "size": "936 MB", - "url": "http://yt-project.org/data/snapshot_028_z000p000.tar.gz" + "url": "https://yt-project.org/data/snapshot_028_z000p000.tar.gz" }, { "code": "Gadget (Eagle)", "description": "Gadget HDF5 snipshot (Eagle) dataset with 2*188^3 particles, including Gas and DM.", "filename": "snipshot_399_z000p000", "size": "521 MB", - "url": "http://yt-project.org/data/snipshot_399_z000p000.tar.gz" + "url": "https://yt-project.org/data/snipshot_399_z000p000.tar.gz" }, { "code": "Gadget (OWLS)", "description": "Gadget HDF5 snapshot (OWLS) dataset with 2*128^3 particles, including Gas and DM.", "filename": "snapshot_033", "size": "269 MB", - "url": "http://yt-project.org/data/snapshot_033.tar.gz" + "url": "https://yt-project.org/data/snapshot_033.tar.gz" }, { "code": "Gadget", "description": "Gadget HDF5 snapshot of a zoom-in disk galaxy including gas and DM.", "filename": "GadgetDiskGalaxy", "size": "432 MB", - "url": "http://yt-project.org/data/GadgetDiskGalaxy.tar.gz" + "url": "https://yt-project.org/data/GadgetDiskGalaxy.tar.gz" }, { "code": "Gadget", "description": "Cosmology output", "filename": "snapshot_010", "size": "98 MB", - "url": "http://yt-project.org/data/snapshot_010.tar.gz" + "url": "https://yt-project.org/data/snapshot_010.tar.gz" }, { "code": "Gadget", "description": "Rotating isothermal sphere collapse test. Includes both gadget binary and HDF5 format files. Load following \"ds = yt.load('snap_505', unit_base={'UnitLength_in_cm': 5.0e16, 'UnitMass_in_g': 1.98992e33, 'UnitVelocity_in_cm_per_s': 46385.190}, bounding_box = [[-3, 3], [-3, 3], [-3, 3]])\"", "filename": "IsothermalCollapse", "size": "8.8 MB", - "url": "http://yt-project.org/data/IsothermalCollapse.tar.gz" + "url": "https://yt-project.org/data/IsothermalCollapse.tar.gz" + }, + { + "code": "Gadget", + "description": "Gadget snapshot with binary format 2 from the Magneticum simulations. The center of the cluster is at [310306.53, 340613.47, 265758.47] in code units. Load with \"ds = yt.load('snap_132', long_ids=True, field_spec='magneticum_box2_hr')\",", + "filename": "MagneticumCluster", + "size": "190 MB", + "url": "https://yt-project.org/data/MagneticumCluster.tar.gz" }, { "code": "SWIFT", "description": "Keplerian ring test. Output is in HDF5 output format. Does not contain cosmological flags in header.", "filename": "KeplerianRing", "size": "765 kB", - "url": "http://yt-project.org/data/KeplerianRing.tar.gz" + "url": "https://yt-project.org/data/KeplerianRing.tar.gz" }, { "code": "SWIFT", "description": "Small cosmological volume from the EAGLE suite of simulations. This contains cosmological flags.", "filename": "EAGLE_6", "size": "70.5 MB", - "url": "http://yt-project.org/data/EAGLE_6.tar.gz" + "url": "https://yt-project.org/data/EAGLE_6.tar.gz" }, { "code": "Gadget 3", "description": "Gadget snapshot with binary format 2", "filename": "Gadget3-snap-format2", "size": "37 MB", - "url": "http://yt-project.org/data/Gadget3-snap-format2.tar.gz" + "url": "https://yt-project.org/data/Gadget3-snap-format2.tar.gz" }, { "code": "Gadget 3", "description": "Gadget snapshot with binary format 2, BigEndian encoding", "filename": "BigEndianGadgetBinary", "size": "723 MB", - "url": "http://yt-project.org/data/BigEndianGadgetBinary.tar.gz" + "url": "https://yt-project.org/data/BigEndianGadgetBinary.tar.gz" }, { "code": "Gizmo", "description": "Cosmological hydro run with 16 comoving Mpc box, 128**3 particles, metals, cooling, etc. Simulation includes param file and 20 outputs covering the redshift range z=0.1 to z=0.", "filename": "gizmo_cosmology_plus", "size": "4.5 GB", - "url": "http://yt-project.org/data/gizmo_cosmology_plus.tar.gz" + "url": "https://yt-project.org/data/gizmo_cosmology_plus.tar.gz" }, { "code": "Gizmo", "description": "Cosmological hydro run with 16 comoving Mpc box, 64**3 particles, metals, cooling, etc. Simulation includes param file and 136 outputs covering the redshift range z=30 to z=0.", "filename": "gizmo_64", "size": "3.0 GB", - "url": "http://yt-project.org/data/gizmo_64.tar.gz" + "url": "https://yt-project.org/data/gizmo_64.tar.gz" }, { "code": "Gizmo (FIRE)", "description": "Cosmological hydro zoom run of a 1e12 Msun halo with metals, cooling, etc. at z=0.", "filename": "FIRE_M12i_ref11", "size": "209 MB", - "url": "http://yt-project.org/data/FIRE_M12i_ref11.tar.gz" + "url": "https://yt-project.org/data/FIRE_M12i_ref11.tar.gz" }, { "code": "Gizmo", "description": "One snapshot of a low resolution idealized MW MHD run after 500 Myr of evolution. Could be loaded with a bounding box of [-400, 400] kpc.", "filename": "gizmo_mhd_mwdisk", "size": "69 MB", - "url": "http://yt-project.org/data/gizmo_mhd_mwdisk.tar.gz" + "url": "https://yt-project.org/data/gizmo_mhd_mwdisk.tar.gz" }, { "code": "Gasoline", "description": "DM-only Cosmology output", "filename": "agora_1e11.00400", "size": "277 MB", - "url": "http://yt-project.org/data/agora_1e11.00400.tar.gz" + "url": "https://yt-project.org/data/agora_1e11.00400.tar.gz" }, { "code": "PKDGrav", "description": "Cosmology output", "filename": "halo1e11_run1.00400", "size": "1 GB", - "url": "http://yt-project.org/data/halo1e11_run1.00400.tar.gz" + "url": "https://yt-project.org/data/halo1e11_run1.00400.tar.gz" }, { "code": "Gasoline", "description": "Tipsy isolated galaxy dataset", "filename": "TipsyGalaxy", "size": "11 MB", - "url": "http://yt-project.org/data/TipsyGalaxy.tar.gz" + "url": "https://yt-project.org/data/TipsyGalaxy.tar.gz" }, { "code": "Gasoline", "description": "Tipsy datasets with auxiliary files", "filename": "TipsyAuxiliary", "size": "39 MB", - "url": "http://yt-project.org/data/TipsyAuxiliary.tar.gz" + "url": "https://yt-project.org/data/TipsyAuxiliary.tar.gz" }, { "code": "Gasoline", "description": "Medium size Tipsy dataset with auxiliary files", "filename": "medium_tipsy", "size": "184 MB", - "url": "http://yt-project.org/data/medium_tipsy.tar.gz" + "url": "https://yt-project.org/data/medium_tipsy.tar.gz" }, { "code": "Gasoline", "description": "Big Tipsy dataset with auxiliary files", "filename": "big_tipsy", "size": "1.4 GB", - "url": "http://yt-project.org/data/big_tipsy.tar.gz" + "url": "https://yt-project.org/data/big_tipsy.tar.gz" }, { "code": "Gizmo", "description": "One z=2 snapshot of a cosmological hydro run with 50 comoving Mpc box, 512^3 particles.", "filename": "SimbaExample", "size": "14 GB", - "url": "http://yt-project.org/data/SimbaExample.tar.gz" + "url": "https://yt-project.org/data/SimbaExample.tar.gz" } ], "ytdata frontend": [ @@ -912,7 +1054,7 @@ "description": "Testing datasets made with the save_as_dataset command.", "filename": "ytdata_test", "size": "1.7 MB", - "url": "http://yt-project.org/data/ytdata_test.tar.gz" + "url": "https://yt-project.org/data/ytdata_test.tar.gz" } ] } diff --git a/extensions.yaml b/extensions.yaml index 9d7daa2..323b4d6 100644 --- a/extensions.yaml +++ b/extensions.yaml @@ -40,11 +40,9 @@ import_as: yt.extensions.viewyt contact: Austin Gilbert - name: ytree - url: http://ytree.readthedocs.io + url: https://ytree.readthedocs.io + image: ytree.png description: | - A merger-tree code with yt-style syntax for loading data and field - access. ytree can create merger-trees from Gadget FoF/Subfind catalogs, - either for all or just a specific set of halos, and can load data from - consistent-trees and Rockstar catalogs. + Analyze merger tree data from multiple sources. It's yt for merger trees! import_as: ytree contact: Britton Smith diff --git a/gallery.yaml b/gallery.yaml index c4b2f33..0b3f7de 100644 --- a/gallery.yaml +++ b/gallery.yaml @@ -1,9 +1,39 @@ +- title: Mesh-refinement for laser-plasma interation simulations with WarpX + textwidth: 7 + imagewidth: 5 + text: > + Yt was used to render this multi-stage laser-plasma acceleration simulation + with the electromagnetic particle-in-cell code + WarpX, see + Vay et al. 2018. + An ultrashort ultraintense laser pulse (red) propagates through a + low-density plasma and triggers plasma oscillations with strong electric + field (yellow-blue). A beam of electrons (white dots) is trapped in this + wake and accelerated to high energies (GeV). The horizontal lines show + lines of plasma particles. For higher accuracy, a refinement patch is added + around the electron beam (white parallelepiped). + images: + - img/gallery/warpx.png +- title: Mixed-morphology SNR simulations with a cloudy environment + textwidth: 7 + imagewidth: 5 + text: > + In + Zhang et al. 2019, + authours used yt to present the 3D simulation of + a mixed-morphology supernova remnant. + The volumetric rendering of density shows in the top panel, + with a density histogram (black curve) + and the transfer function in the bottom panel. + The SNR shock front is in cyan, and dense clouds are in red. + images: + - img/gallery/mmsnr_3d_rendering.png - title: Standing Accretion Shock Instability Spiral Wave in a Core-Collapse Supernova Simulations textwidth: 7 imagewidth: 5 text: > In O'Connor - & Couch (2018), the authors used yt for the visualization of their data. + & Couch (2018), the authors used yt for the visualization of their data. This figure, a volume rendering of entropy near the gain region of a core-collapse supernova, shows the multidimensional hydrodynamic instabilities at work. Both turbulence and the standing accretion shock instability @@ -74,7 +104,7 @@ (2012) and conducted with Enzo. The bottom panels show the density, temperature, and metallicity of the same slice. This figure was published in the reference above as Figure 9. - images: + images: - img/gallery/wise-rp.jpg - title: Density and Temperature Around a Forming Star textwidth: 5 @@ -138,7 +168,7 @@ - title: GMC Identification textwidth: 7 imagewidth: 5 - images: + images: - img/gallery/benincasa.jpg text: > A slice through the z-plane of a typical cloud from Figure 10 from Smith et al. diff --git a/generate.py b/generate.py index 0f6d1e4..c41cc5c 100644 --- a/generate.py +++ b/generate.py @@ -1,7 +1,9 @@ from __future__ import print_function +import git import yaml import os import sys +import tempfile from jinja2 import Environment, FileSystemLoader PATH = os.path.dirname(os.path.abspath(__file__)) @@ -34,12 +36,12 @@ def _page(func): @page('index') def index(): - examples = yaml.load(open("examples.yaml", "r")) + examples = yaml.load(open("examples.yaml", "r"), Loader=yaml.SafeLoader) return {'title': 'Home', 'examples': examples} @page('gallery') def gallery(): - entries = yaml.load(open("gallery.yaml", "r")) + entries = yaml.load(open("gallery.yaml", "r"), Loader=yaml.SafeLoader) return {'entries': entries} name_ignores = ["convert-repo"] @@ -52,20 +54,18 @@ def about(): # Uncomment for rapid dev if "--fast" in sys.argv: return {'developers': []} - import git if yt_path: repo = git.Repo(yt_path) else: - import tempfile - repo_path = tempfile.mkdtemp() - repo = git.Repo.clone_from( - 'https://github.com/yt-project/yt', repo_path) - shortlog = repo.git.shortlog('-ns').split('\n') - repo.close() - devs = set([sl.split('\t')[1] for sl in shortlog]) + with tempfile.TemporaryDirectory() as repo_path: + with git.Repo.clone_from( + "https://github.com/yt-project/yt", repo_path + ) as repo: + shortlog = repo.git.shortlog(["-ns", "HEAD"]).split("\n") + devs = set([sl.split("\t")[1] for sl in shortlog]) for name in name_ignores: devs.discard(name) - return {'developers': sorted(devs, key=lastname_sort)} + return {"developers": sorted(devs, key=lastname_sort)} @page('community') def community(): @@ -73,7 +73,7 @@ def community(): @page('members') def members(): - members = yaml.load(open("members.yaml", "r")) + members = yaml.load(open("members.yaml", "r"), Loader=yaml.SafeLoader) members.sort(key = lambda a: lastname_sort(a['name'])) return {'members': members} @@ -91,7 +91,7 @@ def data(): @page('extensions') def extensions(): - extensions = yaml.load(open("extensions.yaml", "r")) + extensions = yaml.load(open("extensions.yaml", "r"), Loader=yaml.SafeLoader) return {'extensions': extensions} @page('slack') diff --git a/img/examples/10MpcBox_HartGal_csf_a0.500.d_Projection_y_density.png b/img/examples/10MpcBox_HartGal_csf_a0.500.d_Projection_y_density.png index 931e150..802bef3 100644 Binary files a/img/examples/10MpcBox_HartGal_csf_a0.500.d_Projection_y_density.png and b/img/examples/10MpcBox_HartGal_csf_a0.500.d_Projection_y_density.png differ diff --git a/img/examples/DD0044_2d-Profile_density_temperature_cell_mass.png b/img/examples/DD0044_2d-Profile_density_temperature_cell_mass.png index 94c55d5..476fd8b 100644 Binary files a/img/examples/DD0044_2d-Profile_density_temperature_cell_mass.png and b/img/examples/DD0044_2d-Profile_density_temperature_cell_mass.png differ diff --git a/img/examples/galaxy0030_Projection_z_thermal_energy_density_density.png b/img/examples/galaxy0030_Projection_z_thermal_energy_density_density.png index eedbc4d..9759087 100644 Binary files a/img/examples/galaxy0030_Projection_z_thermal_energy_density_density.png and b/img/examples/galaxy0030_Projection_z_thermal_energy_density_density.png differ diff --git a/img/examples/sloshing_nomag2_hdf5_plt_cnt_0150_Slice_z_temperature.png b/img/examples/sloshing_nomag2_hdf5_plt_cnt_0150_Slice_z_temperature.png index 9a23598..e6a6d40 100644 Binary files a/img/examples/sloshing_nomag2_hdf5_plt_cnt_0150_Slice_z_temperature.png and b/img/examples/sloshing_nomag2_hdf5_plt_cnt_0150_Slice_z_temperature.png differ diff --git a/img/examples/snap_033_Slice_x_density.png b/img/examples/snap_033_Slice_x_density.png index 1817b6a..d7a1af7 100644 Binary files a/img/examples/snap_033_Slice_x_density.png and b/img/examples/snap_033_Slice_x_density.png differ diff --git a/img/examples/snip_399_z000p000_1d-Profile_density_temperature.png b/img/examples/snip_399_z000p000_1d-Profile_density_temperature.png index 1b805c3..a701eea 100644 Binary files a/img/examples/snip_399_z000p000_1d-Profile_density_temperature.png and b/img/examples/snip_399_z000p000_1d-Profile_density_temperature.png differ diff --git a/img/extensions/ytree.png b/img/extensions/ytree.png new file mode 100644 index 0000000..ad57508 Binary files /dev/null and b/img/extensions/ytree.png differ diff --git a/img/gallery/mmsnr_3d_rendering.png b/img/gallery/mmsnr_3d_rendering.png new file mode 100644 index 0000000..171a51b Binary files /dev/null and b/img/gallery/mmsnr_3d_rendering.png differ diff --git a/img/gallery/warpx.png b/img/gallery/warpx.png new file mode 100644 index 0000000..8c98054 Binary files /dev/null and b/img/gallery/warpx.png differ diff --git a/img/social/google+.png b/img/social/google+.png deleted file mode 100644 index 8e7fb9b..0000000 Binary files a/img/social/google+.png and /dev/null differ diff --git a/members.yaml b/members.yaml index 9584665..826b062 100644 --- a/members.yaml +++ b/members.yaml @@ -10,6 +10,10 @@ content: > Corentin has been a yt project developer since 2017. He has been involved in maintaining and improving RAMSES' frontend. +- name: Niels Claes + since: 2019 +- name: Jared Coughlin + since: 2020 - name: Brian Crosby since: 2016 - name: Bili Dong @@ -26,6 +30,8 @@ Nathan has been involved in yt development since 2011. He has been involved in writing and maintaining yt's plotting functionality, the FLASH, Enzo, and SPH frontends, and yt's unit system. +- name: Chris Havlin + since: 2021 - name: Cameron Hummels since: 2014 content: > @@ -100,6 +106,15 @@ since: 2014 - name: Brian O'Shea since: 2014 +- name: Clément Robert + since: 2019 + content: + Clément has been using multiple hydro-simulation codes and got frustrated + with the wheel-reinventing that was too often required to read and analyze + code specific data formats. In 2018, he fell in love with yt's philosophy + for building and sharing one flexible tool with a community of users and + developers and started working on a frontend for MPI-AMRVAC, which came to + life in 2019. - name: Douglas Rudd since: 2014 content: > diff --git a/requirements.txt b/requirements.txt index 327abb3..559e256 100644 --- a/requirements.txt +++ b/requirements.txt @@ -1,3 +1,5 @@ pyyaml>=4.2b1 -GitPython==2.1.3 +GitPython==2.1.15 +gitdb2==2.0.6 +gitdb==0.6.4 Jinja2>=2.10.1 diff --git a/templates/about.html b/templates/about.html index f3d9b34..aef1beb 100644 --- a/templates/about.html +++ b/templates/about.html @@ -23,7 +23,7 @@

Mission Statement

- +
diff --git a/templates/base.html b/templates/base.html index 060cd21..26f1f05 100644 --- a/templates/base.html +++ b/templates/base.html @@ -6,7 +6,6 @@ - The yt Project: {{title | capitalize}} @@ -77,7 +76,7 @@
  • yt Blog
  • Quick Start
  • Documentation
    • -
  • ApJS paper +
  • ApJS paper
  • Help!
  • Mailing List
    • diff --git a/templates/community.html b/templates/community.html index c0c8880..9ca9770 100644 --- a/templates/community.html +++ b/templates/community.html @@ -113,12 +113,9 @@

    Sharing Scripts, Projects and Notebooks

    Social Networking

    yt has a presence on twitter, - where occasional updates are posted. Other places for short-form - updates include the - facebook page, - and the - Google+ page, where occasionally - hangouts, videos and live office hours are held. + where occasional updates are posted. Another place for short-form + updates is the + facebook page.

    yt also has a blog, where longer-form diff --git a/templates/data/index.html b/templates/data/index.html index aa3b1f4..19fdfbb 100644 --- a/templates/data/index.html +++ b/templates/data/index.html @@ -61,6 +61,15 @@ Auxiliary Data FilesSize (mb)DescriptionLink + apec_emissivity (v. 3) + 243 KB + X-ray emissivity tables created + with AtomDB v3.0.9 + (for a collisionally ionized plasma), used for creating X-ray + fields. This needs to be multiplied by ne*nH instead of nH**2 (which + was the case in v. 2). Used in yt 4.0 and later. + download + cloudy_emissivity (v. 2) 2.1 MB X-ray emissivity tables created diff --git a/templates/development.html b/templates/development.html index f066c64..a61ac3e 100644 --- a/templates/development.html +++ b/templates/development.html @@ -30,12 +30,7 @@

    Development

    - +
    diff --git a/templates/index.html b/templates/index.html index b73b435..dc4a85e 100644 --- a/templates/index.html +++ b/templates/index.html @@ -209,7 +209,7 @@

    Get yt: all-in-one script.

    If you use yt in a publication, we request that you please consider - citing our method paper + citing our method paper (BibTeX).