diff --git a/index.md b/index.md
index 336f7863..e67adf27 100644
--- a/index.md
+++ b/index.md
@@ -18,7 +18,7 @@ and how to interact with one of those services (AWS) via the command line.
 This lesson assumes a working understanding of the bash shell. If you haven't already completed the [Shell Genomics](https://www.datacarpentry.org/shell-genomics/) lesson, and aren't familiar with the bash shell, please review those materials
 before starting this lesson.
 
-Windows users will need to install PuTTY. See the installation instructions in [Setup](learners/setup.md).
+Windows users will need to install PuTTY. See the installation instructions in [Launching cloud instances on your own](learners/LaunchingInstances.md).
 
 
 ::::::::::::::::::::::::::::::::::::::::::::::::::
diff --git a/learners/setup.md b/learners/setup.md
index f2ecd6ee..9e2fe4e0 100644
--- a/learners/setup.md
+++ b/learners/setup.md
@@ -5,6 +5,6 @@ title: Setup
 This workshop is designed to be run on pre-imaged Amazon Web Services
 (AWS) instances. For information about how to
 use the workshop materials, see the
-[setup instructions](https://www.datacarpentry.org/genomics-workshop/setup.html) on the main workshop page. The Cloud Genomics lesson requires no additional setup.
+[setup instructions](https://datacarpentry.github.io/genomics-workshop/#option-a-recommended-using-the-lessons-with-amazon-web-services-aws) on the main workshop page. The Cloud Genomics lesson requires no additional setup.