Biomedical Informatics Research and Data Science @ Dartmouth

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1. deepslide deepslide Public

   Code for the Nature Scientific Reports paper "Pathologist-level classification of histologic patterns on resected lung adenocarcinoma slides with deep neural networks." A sliding window framework f…

   Python 520 144

2. HistoGAN HistoGAN Public

   Code for "Generative Image Translation for Data Augmentation in Colorectal Histopathology Images" full paper at ML4H Workshop at NeurIPS 2019.

   Python 71 20

3. 3dMRISegmentation 3dMRISegmentation Public

   Code for NeuroImage: Clinical paper "Automatic post-stroke lesion segmentation on MR images using 3D residual convolutional neural network."

   Python 33 10

4. medical-image-preprocessing medical-image-preprocessing Public

   Functions for pre-processing large images

   Python 12 4

5. titan-rtx-benchmark titan-rtx-benchmark Public

   5 1

6. MORE MORE Public

   Code for "Multi-Ontology Refined Embeddings (MORE): A Hybrid Multi-Ontology and Corpus-based Semantic Representation Model for Biomedical Concepts" in the Journal of Biomedical Informatics.

   Python 5 2