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Building enrichmentmap error message : could not parse line 2 of the enrichment file! #553

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@freakytam

image

hello ! friends !
I got this error message...
and here is my input data grofiler results in .txt
I don't know what is the problem maybe is it because colon and "" ?? are those can be problem in the input file?
help me out ! please !

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#gprofiler #enrichmentmap

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  1. risserlin commented on Oct 10, 2024

    @risserlin
    Contributor

    is that ahd g:profiler GEM file format? There looks to be extra columns that EM is not expecting.
    can you send me your g:profiler result file?

  2. freakytam commented on Oct 10, 2024

    @freakytam
    Author

    gProfiler_hsapiens_2024. 10. 9. 오후 10-54-17__multiquery.txt

    Hey , Thank you for your reply
    here it is my file . do you think it is wrong form?

  3. risserlin commented on Oct 11, 2024

    @risserlin
    Contributor

    It is the wrong file format. You need to make sure that you are getting the GEM file.

    Screen Shot 2024-10-11 at 10 05 14 AM

    If you are creating the file yourself then you need to make sure that it is in the generic Enrichment map file format - https://enrichmentmap.readthedocs.io/en/docs-2.2/FileFormats.html#generic-results-files

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