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BUG: Fix OOC Review Findings - #1764

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jmarquisbq wants to merge 109 commits into

BlueQuartzSoftware:developfrom

jmarquisbq:fix/ooc-review-findings

Open

BUG: Fix OOC Review Findings#1764
jmarquisbq wants to merge 109 commits into
BlueQuartzSoftware:developfrom
jmarquisbq:fix/ooc-review-findings

Commits on Oct 28, 2026
- BUG: Preserve cumulative parallel storage requirements
  jmarquisbq
  committed
  eab8494
- BUG: Preserve array selection storage constraints
  jmarquisbq
  committed
  9502eaa
- BUG: Validate KMeans cluster counts and default to one
  jmarquisbq
  committed
  6f76b9b
- BUG: Report checked store flush failures
  jmarquisbq
  committed
  42248cf
- BUG: Report pipeline completion and recovery write failures
  jmarquisbq
  committed
  4c61ae6
- ENH: Add caller-owned HDF5 chunk-shape scratch
  jmarquisbq
  committed
  3d76500
- BUG: Validate HDF5 write selections before transfer
  jmarquisbq
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  613273d
- BUG: Plan selected imports against the complete destination
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  committed
  c6211d6
- BUG: Check Avizo output and close streams on failure
  jmarquisbq
  committed
  b870ff1
- BUG: Add budgeted numeric extent reads for sampled ranges
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  6eb1a4c
- BUG: Validate OOC thresholds and retain startup corrections
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  64cc60c
- PERF: Batch Identify Sample YZ transfers
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  committed
  4ddcb33
- COMP: Use aggregate initialization for the Avizo test handler
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  6f01a1c
- COMP: Avoid inherited field shadowing in Avizo writer tests
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  a2ac458
- COMP: Make Identify Sample test fixture types explicit
  jmarquisbq
  committed
  b721029
- COMP: Fix Linux compiler error
  
  imikejackson
  authored and
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  committed
  743bd3f
- COMP: Fix compiler warning in MacOS.
  
  imikejackson
  authored and
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  fea2914
- COMP: Avoid streaming file-clock durations in import tests
  
  imikejackson
  authored and
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  committed
  3ecbad1
- TEST: Match recovery warnings to import validation order
  
  imikejackson
  authored and
  jmarquisbq
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  dc46b5b
- TEST: Fix failing CI Test
  
  imikejackson
  authored and
  jmarquisbq
  committed
  1fc1d6c
- COMP: Accept reviewed Apple libc++ 18.1 for bounded reads
  
  authored and
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  eb75eab
- TEST: Guard bounded result access before front()
  
  authored and
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  b839590
- COMP: Accept reviewed GCC 11.4 libstdc++ for bounded reads
  
  authored and
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  c5e2e5f
- PERF: Bulk-load Laplacian Smoothing data for out-of-core stores
  
  authored and
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  354c266
- TEST: Stop running network-dependent citation check in CTest
  
  authored and
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  8356a73
- PERF: Add a block-sequential out-of-core path for triangle normals
  
  authored and
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  e5844b4
- PERF: Add a block-sequential out-of-core path for triangle dihedral angles
  
  authored and
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  7cdbf80
- PERF: Add a block-sequential out-of-core path for face IPF coloring
  
  authored and
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  9d418d6
- PERF: Add a block-sequential out-of-core path for feature face misorientation
  
  authored and
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  a47fc17
- PERF: Add a block-sequential out-of-core path for shared feature faces
  
  authored and
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  committed
  50f9ad7
- PERF: Stage winding repair connectivity in scratch records for out-of-core stores
  
  authored and
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  committed
  03921a5
- BUG: Preserve numeric growth initialization across store types
  jmarquisbq
  committed
  d6071ca
- DOC: Describe sampler fixed-memory observation data
  jmarquisbq
  committed
  4eb8733
- STY: Remove trailing whitespace from Identify Sample test
  jmarquisbq
  committed
  e70a589
- COMP: Support reviewed GCC 13 bounded-read allocations
  jmarquisbq
  committed
  7e72079
- COMP: Temporarily capture native CI library headers
  jmarquisbq
  committed
  3c27c99
- COMP: Admit reviewed Apple libc++ bounded reads
  jmarquisbq
  committed
  47b564c
- TEST: Verify Laplacian smoothing with analytic coordinates
  jmarquisbq
  committed
  f2f5c81
- TEST: Cover Laplacian transfer failures and cancellation
  jmarquisbq
  committed
  5bf95fb
- TEST: Verify Triangle Normal algorithm paths and resident stores
  jmarquisbq
  committed
  14308be
- TEST: Verify Triangle Dihedral Angle paths and resident stores
  jmarquisbq
  committed
  bb0ad2a
- TEST: Isolate public test runner preferences
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  committed
  0ed0868
- TEST: Verify shared feature face algorithm and store paths
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  committed
  a47bc41
- TEST: Verify winding normal repair paths and resident stores
  jmarquisbq
  committed
  2faca14
- TEST: Cover resident Face IPF algorithm scenarios
  jmarquisbq
  committed
  fc8980e
- TEST: Cover resident face misorientation algorithm scenarios
  jmarquisbq
  committed
  3f2e4e1
- TEST: Reject wrong-backend stores in nullable factory tests
  jmarquisbq
  committed
  4a83b33
- TEST: Share Catch execution and Application cleanup helpers
  jmarquisbq
  committed
  e40bd0b
- TEST: Move Face IPF disk coverage to the private OOC suite
  jmarquisbq
  committed
  7ddef46
- TEST: Move face misorientation disk coverage to the OOC suite
  jmarquisbq
  committed
  2da4dee
- TEST: Cover IdentifySample orthogonal failures and cancellation
  jmarquisbq
  committed
  0453067
- TEST: Verify public algorithm scope restoration after throws
  jmarquisbq
  committed
  8229fad
- TEST: Compare complete INL writer output and reject bad tails
  jmarquisbq
  committed
  9ce05d1
- TEST: Cover neighbor misorientations with averaging disabled
  jmarquisbq
  committed
  98fb91d
- TEST: Cover c-axis misalignments with averaging disabled
  jmarquisbq
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  adc4404
- TEST: Cover buffered triangle winding transfers and cancellation
  jmarquisbq
  committed
  d898f6c
- TEST: Check geometry normal utility values and cancellation
  jmarquisbq
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  4ccf8c0
- TEST: Cover triangle normal block transfers and cancellation
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  a02cc8a
- TEST: Cover dihedral angle block transfers and cancellation
  jmarquisbq
  committed
  db6ac82
- TEST: Verify average-orientation voxel ordering on both paths
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  6b9224c
- TEST: Verify complete ASCII structured-points output
  jmarquisbq
  committed
  aaec3f5
- TEST: Reject watershed markers without temporary storage support
  jmarquisbq
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  27269b0
- TEST: Reject watershed without temporary storage support
  jmarquisbq
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  095873a
- TEST: Check analytical interior surface metrics
  jmarquisbq
  committed
  81bd60d
- TEST: Verify resident stores throughout image contouring
  jmarquisbq
  committed
  4aa712a
- TEST: Preserve normals when winding-only repair is selected
  jmarquisbq
  committed
  7d15cb2
- TEST: Reject mismatched NaNs in floating-array comparisons
  jmarquisbq
  committed
  fec2826
- DOC: Correct MultiThresholdObjects verification inventory
  jmarquisbq
  committed
  535c5ba
- COMP: Remove temporary native toolchain capture
  jmarquisbq
  committed
  a328bf0
- ENH: Reserve optional working memory without cache eviction
  jmarquisbq
  committed
  445e2fa
- BUG: Compute exact arithmetic centroids across periodic boundaries
  jmarquisbq
  committed
  e0b6649
- PERF: Batch out-of-core triangle winding volume and reversal
  jmarquisbq
  committed
  adf935c
- BUG: Reject invalid vertices in buffered triangle calculations
  jmarquisbq
  committed
  6fa2256
- BUG: Bound new out-of-core mesh working buffers
  jmarquisbq
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  446b2c9
- COMP: Use explicit types for centroid test budgets
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  a445744
- REV: Match KMeans default test to float64 means
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  4a1136f
- TEST: Correct H5Oina batch-tail raster coordinates
  jmarquisbq
  committed
  30b4eb6
- COMP: Fix MSVC test builds and remove unused includes
  jmarquisbq
  committed
  7b0b0ca
- DOC: Clarify bounded mesh buffer contracts
  jmarquisbq
  committed
  3d45c4c
- BUG: Bound OOC face orientation lookup buffers
  jmarquisbq
  committed
  1f3b449
- BUG: Stream OOC shared face metadata through admitted blocks
  jmarquisbq
  committed
  b08517e
- REV: Restore the owning default resolver after test scopes
  jmarquisbq
  committed
  001ffc8
- REV: Remap geometry references for each imported alias
  jmarquisbq
  committed
  3b7c1ab
- REV: Share algorithm override precedence with triangle winding
  jmarquisbq
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  4274daa
- REV: Apply the shared algorithm policy to mesh smoothing
  jmarquisbq
  committed
  b59ea3b
- REV: Honor override precedence in Zero Crossing
  jmarquisbq
  committed
  933296f
- REV: Make bounded-read ownership explicit
  jmarquisbq
  committed
  b24a94e
- REV: Clarify HDF5 codec and chunk helper contracts
  jmarquisbq
  committed
  5ea0175
- REV: Clarify private import and publication helpers
  jmarquisbq
  committed
  08ed84e
- REV: Clarify pipeline diagnostics and core helper ownership
  jmarquisbq
  committed
  928deb8
- REV: Clarify bounded orientation lookup helpers
  jmarquisbq
  committed
  b840459
- REV: Clarify centroid working-buffer ownership
  jmarquisbq
  committed
  75108b6
- REV: Include KMeans declaration providers directly
  jmarquisbq
  committed
  d131d55
- REV: Clarify component-labeling helper state
  jmarquisbq
  committed
  367d302
- REV: Clarify bounded mesh helper ownership and diagnostics
  jmarquisbq
  committed
  2633608
- REV: Use fixed scratch arrays for triangle angles
  jmarquisbq
  committed
  2c06df7
- REV: Clarify Avizo writer state and diagnostics
  jmarquisbq
  committed
  1da1c94
- REV: Make regression fixture contracts explicit
  jmarquisbq
  committed
  0bd02e9
- REV: Make geometry remapper ownership explicit
  jmarquisbq
  committed
  5fc3872
- TEST: Restore the incoming resolver after selected-import tests
  jmarquisbq
  committed
  ac02e25
- REV: Declare special members for scoped helpers and fixtures
  jmarquisbq
  committed
  f3c63f4
- REV: Use standard arrays for hexadecimal lookup tables
  jmarquisbq
  committed
  67bdc2c
- TEST: Avoid shadowing the saved resolver capture
  jmarquisbq
  committed
  ec235c1
- REV: Use pointer suffixes in selected-import tests
  jmarquisbq
  committed
  3aa2129
- REV: Keep import publication and rollback in DataStructure
  jmarquisbq
  committed
  96a0a69
- STY: Declare special members for new core helpers
  jmarquisbq
  committed
  8b5304d
- REV: Address review findings for the OOC review fixes
  
  joeykleingers
  authored and
  jmarquisbq
  committed
  98022e9
- ENH: Store the out-of-core size thresholds in GB
  joeykleingers
  committed
  2d6cc01
- COMP: Compare file times as bool in the GB preference test
  joeykleingers
  committed
  1fc079b

Commits

Commits on Oct 28, 2026