ComputationalRegulatoryGenomicsICL

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1. GenomicInteractions GenomicInteractions Public

   R/Bioconductor package for handling Genomic interaction data, annotating genomic features with interaction information and producing summary plots / statistics

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2. TFBS TFBS Public

   TFBS perl module

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3. GenomicInteractions-old GenomicInteractions-old Public

   R/Bioconductor package for handling Genomic interaction data, annotating genomic features with interaction information and producing summary plots / statistics

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4. tad_cnes_harmston2017 tad_cnes_harmston2017 Public

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5. human-tf-isoforms-thesis human-tf-isoforms-thesis Public

   Genome-wide analysis of alternative isoforms of human TFs (Chapters 3, 4 and 5 of Sviatoslav Sidorov's PhD thesis)

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6. cageflow cageflow Public

   This is the first version of the Lenhard's group custom CAGE pipeline implemented in nextflow and nf-core

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