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Genentech
decima
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Refactor/write h5 speedup numpy2 compat
- #55
#55
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MiqG
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Genentech:main
Genentech/decima:main
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MiqG:refactor/write-h5-speedup-numpy2-compat
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Refactor/write h5 speedup numpy2 compat
#55
MiqG
wants to merge 6 commits into
Genentech:main
Genentech/decima:main
from
MiqG:refactor/write-h5-speedup-numpy2-compat
MiqG/decima:refactor/write-h5-speedup-numpy2-compat
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Commits on May 19, 2026
fixed small compatibility numpy 2.x
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89939c1
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Commits on May 20, 2026
refactor writ h5 to speed up
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e466c2e
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Commits on May 22, 2026
added ddp option
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480912d
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Commits on May 29, 2026
sparse array compatibility issue
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5d133c1
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lightning was creating a new version when resuming and starting from scratch. Fixed that
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f059c77
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Commits on Jun 19, 2026
fixes to run attribution analysis without needing predictions for every gene, and avoid writing bigwig
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16d1fa6
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