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GDI SOP - Release v2 - #78

Merged
M-casado merged 238 commits into
mainfrom
dev
Oct 21, 2026
Merged

M-casado merged 238 commits into
mainfrom
dev

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@M-casado

@M-casado M-casado commented Oct 21, 2026 •

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Summary

Grouped changes to the GDI SOPs from v1 to v2.

Types of changes

  • Bug fix (non-breaking change which fixes an issue)
  • New content (non-breaking change which adds new content)
  • Modified content (non-breaking change which modifies existing content)
  • Breaking change (fix or feature that would cause existing functionality to not work as expected)

Motivation and Context

Current repository state has reached maturity for v2 release

References

NA

Changes Introduced

  • Added 6 new SOPs
  • Removed 2 existing SOPs (SOP0002 and SOP0003)
  • Updated automatic checks
  • Updated documentation

Review

Individual SOPs have been reviewed, but this PR introduces new minor changes here and there and updated documentation.

Additional Notes

NA

Checklist:

General Compliance:

  • My changes follow the code style of this project (GDI SOP Style Guide) and the file naming conventions of the file accessioning proposal.
  • I have verified that all new updated content is accessible, including checking that all external references are readable (i.e., no broken links). These may include references to external resources that should be resolvable, and internal references among SOPs.
  • I have properly added this PR's changes to the repository CHANGELOG.md.

Only applicable if the PR includes new, or changes to, GDI SOPs (i.e., documents at sops/):

  • My SOP-related changes adhere to the Generic SOP Template, including format and required fields.
  • I have consulted the Charter, ISM, and ORR documents to ensure compliance.
  • I am complying with the established procedure for SOP creations and modifications, including respecting review phases and notifying needed contributors for reviews.

elisavettorstensson and others added 30 commits February 19, 2025 14:18
Created the first draft of the GDI-SOP0008_Node-Helpdesk-Ticket-Classification
Update ``dev`` branch from ``main``
…008_sop-node-helpdesk-ticket-classification.md

I changed to lower case
update template SOP number
changed the name of the sop, updated version and added topic
…move

Show how the diagram can be added in-line
….md to GDI-SOP0008_node-helpdesk-ticket-classification.md

changed the filename and title of SOP
Added Marcos Casado Barbero as reviewer
Co-authored-by: Marcos Casado <mcasado@ebi.ac.uk>
typo

Co-authored-by: Marcos Casado <mcasado@ebi.ac.uk>
typo

Co-authored-by: Marcos Casado <mcasado@ebi.ac.uk>
typo

Co-authored-by: Marcos Casado <mcasado@ebi.ac.uk>
M-casado and others added 26 commits August 19, 2026 15:26
Annual review of SOP0007: GDI-SOP0007_sop-template-creation.md
…ops-and-metadata-validation-steps-for-dcat-and-beacon

Add SOP0013 for FDP submission metadata validation
…-dataset-from-node-allele-frequency-beacon

Add SOP0012 for Withdraw Dataset from Node Allele Frequency Beacon
…sets-metadata-to-node-beacon

Add SOP0014 Add datasets metadata to node beacon
@M-casado M-casado self-assigned this Oct 21, 2026
@M-casado
M-casado merged commit 1dfd522 into main Oct 21, 2026
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5 participants