Issues

• fails to configure with CMake 4

  Martinsos/edlib#242 · Filter by author yurivict opened on Sep 28, 2026
  7

• Add building/testing of Edlib in CI (Github Actions) on Windows

  good first issuewindows
  Martinsos/edlib#239 · Filter by author Martinsos opened on May 11, 2025

• Inconsistency with API on empty strings

  bug
  Martinsos/edlib#228 · Filter by author nkkarpov opened on Sep 7, 2024
  2

• Refactor .github/workflows/ci.yaml so that I first collect all the wheels and sdist as artifacts and only then publish them

  Martinsos/edlib#227 · Filter by author Martinsos opened on Sep 4, 2024

• [HELP WANTED] Improve bindings/python project's setup and organization

  help wantedpython
  Martinsos/edlib#226 · Filter by author Martinsos opened on Sep 4, 2024

• [HELP WANTED] In Github Actions, get building of python wheels working on macos-14 (arm64)

  help wantedpython
  Martinsos/edlib#225 · Filter by author Martinsos opened on Sep 4, 2024

• Documentation outdated (v1.1.2 vs v1.2.7)

  Martinsos/edlib#220 · Filter by author sodiumnitrate opened on Sep 20, 2023

• Multiple locations but one CIGAR?

  Martinsos/edlib#219 · Filter by author baraaorabi opened on Sep 6, 2023

• Choosing longest or shortest alignment

  Martinsos/edlib#213 · Filter by author brendanf opened on Apr 5, 2023
  1

• results different with usearch and vsearch global alignment

  Martinsos/edlib#209 · Filter by author jianshu93 opened on Nov 3, 2022

• Missing table data in paper

  Martinsos/edlib#204 · Filter by author RagnarGrootKoerkamp opened on Apr 12, 2022

• Cigar results interpretation

  bug
  Martinsos/edlib#203 · Filter by author luchaoqi opened on Mar 22, 2022

• finding all alignments within the string

  Martinsos/edlib#202 · Filter by author mehdiborji opened on Mar 19, 2022
  5

• Mention Perl binding in Readme

  Martinsos/edlib#200 · Filter by author wollmers opened on Mar 10, 2022
  2

• memory leak identified in myersCalcEditDistanceSemiGlobal

  bug
  Martinsos/edlib#193 · Filter by author GDCCP opened on Oct 18, 2021
  1

• Error when query or target is the empty string and task='path'

  bug
  Martinsos/edlib#191 · Filter by author RubenBSB opened on Oct 6, 2021

• Mention in README that overlap is not supported (and can't be due to how edit distance works)

  Martinsos/edlib#182 · Filter by author Martinsos opened on Apr 24, 2021

• Binary wheels for Windows

  enhancement
  Martinsos/edlib#178 · Filter by author ofek opened on Feb 16, 2021
  1

• Figure out if we should remove CMake

  Martinsos/edlib#164 · Filter by author Martinsos opened on Oct 10, 2020
  7

• Use Meson in CI

  Martinsos/edlib#162 · Filter by author Martinsos opened on Oct 10, 2020
  1

  

• Memory leak when used in C++

  bughelp wantedwindows
  Martinsos/edlib#155 · Filter by author SigmaOrionis opened on Jul 7, 2020
  7

• Idea: implement performance tests that enable easy performance optimizations

  enhancementimportant
  Martinsos/edlib#153 · Filter by author Martinsos opened on Jun 27, 2020

• Emphasize in README that Edlib does not support local alignment (SW)

  Martinsos/edlib#149 · Filter by author Martinsos opened on Mar 27, 2020

• Faster edit distance for short strings

  enhancementimportant
  Martinsos/edlib#144 · Filter by author lesshaste opened on Mar 3, 2020
  21

• Create FAQ!

  Martinsos/edlib#142 · Filter by author Martinsos opened on Jan 15, 2020