Issues

• PR 167 breaks task re-use on SBG.

  bug
  NGS360/PAML#176 · Filter by author golharam opened on Oct 16, 2026

• NGS360Platform.get_tasks_by_name silently returns at most 10 runs (no pagination)

  NGS360/PAML#130 · Filter by author accumb3ns opened on Aug 18, 2026

• get_task_output is called multiple time per workflow due to how launcher works.

  enhancement
  NGS360/PAML#105 · Filter by author golharam opened on Apr 3, 2026

• copy_folder fails on SBG

  NGS360/PAML#101 · Filter by author kmavrommatis opened on Jan 26, 2026
  1

• allow submit_task that is disable-reuse

  NGS360/PAML#93 · Filter by author sylviachien opened on Sep 8, 2025

• Enable platform-specific install

  enhancement
  NGS360/PAML#89 · Filter by author golharam opened on Jul 11, 2025

• Submitting workflows to Omics with large inputs is limited to 50,000 bytes

  bugOmics
  NGS360/PAML#81 · Filter by author golharam opened on Apr 29, 2025
  3

• unit tests using Python 3.13 fails due to pycurl deprecation

  NGS360/PAML#55 · Filter by author golharam opened on Feb 5, 2025

• get_task_state fails with unknown task state in Arvados

  bug
  NGS360/PAML#26 · Filter by author golharam opened on Oct 1, 2024

• wait_for_task method should only wait for 60 seconds if the last query was at least 60 seconds.

  enhancement
  NGS360/PAML#24 · Filter by author golharam opened on Sep 24, 2024

• get_file_id returns a collection uuid + file path even when file does not exist.

  bug
  NGS360/PAML#21 · Filter by author golharam opened on Aug 3, 2024

• Is there way to validate the CWL inputs on the given platform prior to calling submit task?

  enhancement
  NGS360/PAML#9 · Filter by author golharam opened on May 9, 2024

• stage_task_output in the SBG class is old and can go away.

  NGS360/PAML#7 · Filter by author golharam opened on May 1, 2024

• get_task_status should use enums instead of text for return values.

  enhancement
  NGS360/PAML#6 · Filter by author golharam opened on May 1, 2024

• Secondary files not captured in get_task_output

  NGS360/PAML#4 · Filter by author golharam opened on Apr 24, 2024