Add override mechanism for algorithm containers, transfer explicit `.sif` images with HTCondor - #464

Merged

agitter merged 12 commits into

Reed-CompBio:mainfrom

jhiemstrawisc:explicit-sif-transfer

Jun 6, 2026

Commits on Apr 29, 2026

Allow for explicit container overrides via configuration, xfer sif with HTCondor
jhiemstrawisc
committed
4833590
Add basic logging for debugging resolved sif imgs
jhiemstrawisc
committed
08b5d80
Standardize detection of container framework for apptainer/singularity
jhiemstrawisc
committed
55c2a16
Fix image hierarchy logic
jhiemstrawisc
committed
341b30c
Add ALGORITHM_REGISTRY and load algorithms via importlib
jhiemstrawisc
committed
28d132d
Validate containers.images keys against ALGORITHM_REGISTRY
jhiemstrawisc
committed
40a6e9e
Update contributing docs for ALGORITHM_REGISTRY registration
jhiemstrawisc
committed
9a5c631
Unify container image resolution into ResolvedImage
jhiemstrawisc
committed
a0ffc29
Clarify HTCondor .sif transfer docs in config.yaml
jhiemstrawisc
committed
6e9a26d
Get alg name _values_ when constructing runner.py's algorithms dict
jhiemstrawisc
committed
09fbd1d
Incorporate Review Feedback
jhiemstrawisc
committed
f09c88f
Post-rebase linting
jhiemstrawisc
committed
2599ec8