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Add paper overview and reproduction workflow to README - #10

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VEK239 merged 1 commit into
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publication/readme-paper-overview
Oct 4, 2026
Merged

VEK239 merged 1 commit into
mainfrom
publication/readme-paper-overview

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@VEK239 VEK239 commented Oct 4, 2026

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Expand the main README into a self-contained paper repository overview: explain the R/T/P objectives and model, summarize the central ablation and frozen-probe results, and provide installation and inference examples.

Add a four-stage reproduction workflow covering input assets, matched training, evaluation and expected outputs, with a runnable seven-condition training loop and links to detailed protocols. Preserve the manuscript schematic at the top, the compact repository tree and the BioFM @ ICDM’26 acceptance citation.

Validation: checked local README links, training commands against the CLI and all seven presets, and numerical summaries against recorded result tables. Documentation-only change.

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VEK239 merged commit a880aaf into main Oct 4, 2026
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