MorphCell data workspaces

This repository contains the preprocessing code and workspace documentation for the datasets used by MorphCell.

Data release

The MorphCell dataset is available at ScienceDB. Reserved DOI: 10.57760/sciencedb.0132h.

Workspaces

• colon/: human colon cell preprocessing
• wheat/: wheat root cell preprocessing
• redblood/: red blood cell preparation
• IntrA/: IntrA point-cloud preparation
• ShapeNet55-34/: ShapeNet55/34 data organization

See the README in each directory for its data source, layout, scale conventions, and preprocessing workflow.

Environment

Install the shared environment from the repository root:

uv sync