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Port the pileup, cut-site tables and the memory planner — Closes #3 - #8

Draft
conradbzura wants to merge 3 commits into
quadrat-2-package-skeletonfrom
quadrat-3-pileup
Draft

conradbzura wants to merge 3 commits into
quadrat-2-package-skeletonfrom
quadrat-3-pileup

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