Issues

• grg process zygosity incorrect with missing data

  bug
  aprilweilab/grgl#116 · Filter by author dcdehaas opened on Feb 16, 2026

• Consider segmented CSR representation

  enhancement
  aprilweilab/grgl#102 · Filter by author dcdehaas opened on Jan 8, 2026

• grg split: race condition in threaded version

  bug
  aprilweilab/grgl#100 · Filter by author dcdehaas opened on Dec 19, 2025

• Creating GRG from VCF with missing data fails assertion

  bug
  aprilweilab/grgl#89 · Filter by author dcdehaas opened on Oct 10, 2025
  

• Support file objects (streams) in pygrgl APIs

  enhancement
  aprilweilab/grgl#80 · Filter by author dcdehaas opened on Aug 12, 2025
  

• Look into matmul() support for scipy.sparse.* matrix types

  enhancement
  aprilweilab/grgl#67 · Filter by author dcdehaas opened on Jul 10, 2025
  1

• Replace grg convert command with igdtools

  aprilweilab/grgl#51 · Filter by author dcdehaas opened on Mar 21, 2025
  1

• Something to consider: sex chromosomes

  good first issue
  aprilweilab/grgl#31 · Filter by author AprilWei001 opened on Nov 19, 2024
  4

  

• Traverse GRG edges from disk

  aprilweilab/grgl#29 · Filter by author dcdehaas opened on Nov 15, 2024
  1

• TS-GRG: Consider support for infinite-sites modeled mutations

  low priority
  aprilweilab/grgl#25 · Filter by author dcdehaas opened on Oct 16, 2024