Issues

• PXDesign (expanding candidate quantity) and PPIFlow (improving candidate quality)

  bytedance/PXDesign#23 · Filter by author linjing-lab opened on Oct 8, 2026

• Cyclic peptide design in Protenix-Server

  bytedance/PXDesign#22 · Filter by author aprijal99 opened on Aug 31, 2026

• binder monomer

  bytedance/PXDesign#21 · Filter by author Yuzhe-Chen7221 opened on May 16, 2026

• Missing Figure 2g and evidence of PXDesign-d outperforming hallucination based approaches

  bytedance/PXDesign#20 · Filter by author ComputationTime opened on May 12, 2026

• Designed Binders CSV

  bytedance/PXDesign#19 · Filter by author young-su-ko opened on Mar 11, 2026

• Will PXDesign-h version be released？

  bytedance/PXDesign#13 · Filter by author wyku opened on Jan 7, 2026

• Question about Protenix version upgrade and MSA support (ColabFold server)

  assigned
  bytedance/PXDesign#12 · Filter by author KARENLHAO opened on Dec 30, 2025
  

• Share this Install.sh script with peers who are using older Linux systems.

  enhancement
  bytedance/PXDesign#10 · Filter by author yuanpengX opened on Dec 22, 2025
  

• Binder scaffold/framework specification

  bytedance/PXDesign#8 · Filter by author rano1256 opened on Dec 21, 2025

• Resumable Pipeline & UX Improvements for Long-Running Jobs

  enhancement
  bytedance/PXDesign#6 · Filter by author cytokineking opened on Dec 19, 2025
  4

  

• repo for Blackwell GPUs (RTX 6000)

  enhancement
  bytedance/PXDesign#2 · Filter by author 21tesla opened on Dec 18, 2025
  3

• list index out of range

  good first issue
  bytedance/PXDesign#1 · Filter by author NanoDesign2025 opened on Dec 17, 2025
  3