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PyRMD-Studio

About PyRMD Studio is an open-source GUI suite democratizing AI for drug discovery. It empowers non-experts to run Ligand-Based and Structure-Based Virtual Screening without coding. By using Butina clustering, it prevents data leakage while achieving a 3.3-fold screening speedup over previous versions.

The installation script automates dependency management and system configuration.

  1. Download the complete PyRMD Studio package and extract it to a directory where you have write permissions.

  2. Open a terminal window and navigate to the extracted directory.

  3. Ensure you are logged in as a regular user, not as root.

  4. Execute the installation script by running the following command:

       bash install_pyrmd_studio.sh
    
  5. Follow the on-screen prompts. The script will detect if Conda is installed and install Miniconda if necessary. It will then create a dedicated Conda environment for PyRMD Studio. The process typically takes ~10 minutes.

  6. When prompted, select the user-specific installation. This is the recommended option as it does not require administrator privileges.

A sep-by-step guide on how to use PyRMD Studio is provided inside the Tutorial folder.

About

About PyRMD Studio is an open-source GUI suite democratizing AI for drug discovery. It empowers non-experts to run Ligand-Based and Structure-Based Virtual Screening without coding. By using Butina clustering, it prevents data leakage while achieving a 3.3-fold screening speedup over previous versions.

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