Issues

• auto-determine y-axis expansion in plotSelectionProb

  enhancement
  fmicompbio/monaLisa#88 · Filter by author mbstadler opened on Mar 24, 2025

• omnibus test for binned approach

  enhancement
  fmicompbio/monaLisa#73 · Filter by author machlabd opened on Apr 6, 2024

• binned enrichment analysis for sets of motifs

  enhancement
  fmicompbio/monaLisa#72 · Filter by author mbstadler opened on Apr 5, 2024

• Return genomic coordinates of sampled background set

  enhancement
  fmicompbio/monaLisa#61 · Filter by author csoneson opened on Nov 3, 2022

• motifSimilarity (former clusterPWMs) features

  fmicompbio/monaLisa#23 · Filter by author mbstadler opened on Jun 24, 2019
  2

• Lisa on motifs from de novo motif finding?

  fmicompbio/monaLisa#12 · Filter by author LukasBurger opened on Jun 20, 2019
  1

• log-odds score cutoff when dumping PWMs to a file

  fmicompbio/monaLisa#2 · Filter by author mbstadler opened on Apr 21, 2018
  1