Issues

• Clone succeeds but checkout fails

  jorvis/GALES#35 · Filter by author sec4zj-tech opened on Apr 16, 2024
  1

  

• Re-running GALES after system crash

  jorvis/GALES#33 · Filter by author BH-Poon opened on Apr 25, 2022
  1

• Error message as not a sudoers

  jorvis/GALES#32 · Filter by author sadhanabhattarai opened on Apr 25, 2022
  1

  

• Update reference databases

  jorvis/GALES#31 · Filter by author jorvis opened on Apr 29, 2021
  

• ruamel package?

  jorvis/GALES#29 · Filter by author rsc3 opened on Aug 10, 2020

• Option to change output directory for visualization step?

  jorvis/GALES#28 · Filter by author jyager3 opened on Aug 10, 2020

• Daemon Issue

  jorvis/GALES#27 · Filter by author sadler7 opened on Aug 8, 2020
  7

• Job Error - Annotation File Field or Mounting Path Issue?

  jorvis/GALES#25 · Filter by author birdbysnow opened on May 4, 2020
  3

  

• Incorrect gff3 output file format

  jorvis/GALES#24 · Filter by author nsuvarnaiari opened on Sep 16, 2019
  2

• Include more file output options while running GALES

  jorvis/GALES#23 · Filter by author nsuvarnaiari opened on Sep 13, 2019

• Add support for "Deploy to cloud" button

  enhancement
  jorvis/GALES#22 · Filter by author jorvis opened on Aug 22, 2019
  

• Docker running, output error

  jorvis/GALES#21 · Filter by author ghost opened on Aug 17, 2019
  19

• Include version numbers of all software in comments of final GFF3 file

  enhancement
  jorvis/GALES#20 · Filter by author jorvis opened on May 9, 2019

• Visualization tool stopping at BigBED file

  bug
  jorvis/GALES#16 · Filter by author JenHauen16 opened on Apr 24, 2019
  1

  

• Add option for mapping to a reference

  enhancement
  jorvis/GALES#11 · Filter by author jorvis opened on Feb 11, 2019
  1

  

• Add option to specify input type closed/contigs and linear/circular

  enhancement
  jorvis/GALES#10 · Filter by author jorvis opened on Feb 11, 2019
  1

  

• Add step to do gene prediction and rotate molecule to dnaA before rest of searches

  enhancement
  jorvis/GALES#9 · Filter by author jorvis opened on Feb 11, 2019
  1

  

• Unable to run 'download_reference_data' with 32 bit Python 3

  jorvis/GALES#8 · Filter by author rhowar23 opened on Aug 14, 2018

• ncRNA features need exons in the GFF3 gene graph

  bug
  jorvis/GALES#5 · Filter by author jorvis opened on Dec 27, 2017

• Test with Toil runner again, symlinks may now be supported

  jorvis/GALES#4 · Filter by author jorvis opened on Dec 5, 2017

• Use --pack to create self-contained pipeline before execution.

  jorvis/GALES#3 · Filter by author jorvis opened on Dec 5, 2017

• Add support for miRNA target site prediction

  enhancement
  jorvis/GALES#1 · Filter by author jorvis opened on Jan 3, 2017