Issues

• test warnings

  microbiomedata/sample-annotator#150 · Filter by author turbomam opened on Apr 21, 2025

• find a place to save extract-study-ids-with-biosamples stats

  microbiomedata/sample-annotator#148 · Filter by author turbomam opened on Apr 19, 2025
  1

• get NLCD values for air study

  microbiomedata/sample-annotator#144 · Filter by author turbomam opened on Jan 14, 2025
  

• create report of GOLD ecosystems and mixs environmental triads

  microbiomedata/sample-annotator#142 · Filter by author turbomam opened on Jan 14, 2025
  1

  

• GOLD to MongoDB code essentially has two levels of caching: cachedir/ and MongoDB itself

  microbiomedata/sample-annotator#138 · Filter by author turbomam opened on Jan 14, 2025
  

• GOLD to MongoDB code doesn't pull in Organisms or Sequencing Projects from Studies that don't have Biosamples

  microbiomedata/sample-annotator#135 · Filter by author turbomam opened on Jan 14, 2025
  

• SSSOM mapping file between GOLD fields and NMDC slots

  microbiomedata/sample-annotator#114 · Filter by author sujaypatil96 opened on Jan 10, 2023
  

• Web form that accepts dataset

  microbiomedata/sample-annotator#101 · Filter by author sujaypatil96 opened on Jul 7, 2022
  3

  

• Inconsistency between data in GOLD and data from bioregistry

  bug
  microbiomedata/sample-annotator#93 · Filter by author sujaypatil96 opened on Jun 7, 2022

• issue-79-Generalizable-Cleaning-Scripts

  microbiomedata/sample-annotator#79 · Filter by author aarleed opened on Apr 30, 2022
  1

• Inconsistent env_broad_scale column

  microbiomedata/sample-annotator#77 · Filter by author jeaniceangelica opened on Apr 28, 2022
  4

• Add a RTD page

  microbiomedata/sample-annotator#5 · Filter by author cmungall opened on Jul 13, 2021
  

• add flask wrapper

  microbiomedata/sample-annotator#4 · Filter by author cmungall opened on Jul 12, 2021

• Add NER method to suggest ENVO triad from description

  microbiomedata/sample-annotator#3 · Filter by author cmungall opened on Jul 12, 2021
  4