Repositories list

• Synapse-Repository-Services

  Public
  The Synapse Repository Services project is the home of the JSON REST web services for Synapse.

  Java

  •

  Apache License 2.0

  •6161 forks•4444 stars•00 issues•2121 pull requests•Updated Jun 13, 2026Jun 13, 2026

• synapser

  Public
  An R package providing programmatic access to Synapse

  rsynapse

  rsynapse

  R

  •

  Apache License 2.0

  •2222 forks•3737 stars•33 issues•33 pull requests•Updated Jun 12, 2026Jun 12, 2026

• SynapseWebClient

  Public
  The web client of the Synapse REST service core

  JavaScript

  •

  Apache License 2.0

  •3939 forks•2424 stars•11 issue•1111 pull requests•Updated Jun 12, 2026Jun 12, 2026

• synapse-web-monorepo

  Public
  Monorepo for Synapse Web projects

  TypeScript

  •

  Apache License 2.0

  •3737 forks•1010 stars•55 issues•3838 pull requests•Updated Jun 12, 2026Jun 12, 2026

• Synapse-Stack-Review-Agenda

  Public
  This is the agenda for the weekly Synapse stack release meeting

  HTML

  •66 forks•00 stars•00 issues•11 pull request•Updated Jun 12, 2026Jun 12, 2026

• agora-data-tools

  Public
  A place for Agora's ETL and Data Testing

  Python

  •

  Apache License 2.0

  •44 forks•22 stars•00 issues•1010 pull requests•Updated Jun 12, 2026Jun 12, 2026

• sage-monorepo

  Public
  ✨ Monorepo for OpenChallenges, BioArena, Agora, and other open-source apps developed to advance open science and collaborative research.

  angularopenapimonorepo+ 10

  angularopenapimonorepofull-stackfairdeveloper-experiencenxagoradev-exspecification-first+ 3

  TypeScript

  •

  Apache License 2.0

  •1717 forks•2727 stars•1010 issues•88 pull requests•Updated Jun 12, 2026Jun 12, 2026

• snowflake

  Public
  Snowflake Administration, Transformations, and Analytics

  snowflake

  snowflake

  Python

  •

  Apache License 2.0

  •44 forks•66 stars•00 issues•1616 pull requests•Updated Jun 12, 2026Jun 12, 2026

• synapsePythonClient

  Public
  Programmatic interface to Synapse services for Python

  pythonsynapsebdf-toolbox

  pythonsynapsebdf-toolbox

  Python

  •

  Apache License 2.0

  •7575 forks•7979 stars•11 issue•1313 pull requests•Updated Jun 12, 2026Jun 12, 2026

• fs-synapse

  Public
  A Synapse implementation of the PyFileSystem2 interface

  Python

  •

  Apache License 2.0

  •11 fork•00 stars•00 issues•11 pull request•Updated Jun 11, 2026Jun 11, 2026

• core-models

  Public
  Sage repository for data models and core models work

  JavaScript

  •00 forks•33 stars•33 issues•00 pull requests•Updated Jun 11, 2026Jun 11, 2026

• Synapse-Stack-Builder

  Public
  Project for building a complete Synapse Stack

  Java

  •

  Apache License 2.0

  •2626 forks•66 stars•00 issues•1111 pull requests•Updated Jun 10, 2026Jun 10, 2026

• Genie

  Public
  Validation and processing of GENIE files

  pythonetlgenie+ 2

  pythonetlgeniedpecomponc

  Python

  •

  MIT License

  •1111 forks•1515 stars•22 issues•11 pull request•Updated Jun 10, 2026Jun 10, 2026

• agent-skills

  Public
  This repository contains agent skills that are leveraged across Sage Bionetworks

  Apache License 2.0

  •77 forks•55 stars•11 issue•22 pull requests•Updated Jun 9, 2026Jun 9, 2026

• synapse-mcp

  Public
  A Model Context Protocol (MCP) server that enables AI agent access to Synapse. Deployed into AWS ECS via https://github.com/Sage-Bionetworks-IT/synapse-mcp-infr…

  Python

  •

  MIT License

  •00 forks•22 stars•11 issue•1212 pull requests•Updated Jun 9, 2026Jun 9, 2026

• ChallengeWorkflowTemplates

  Public
  A collection of challenge CWL tool and workflow templates to connect with SynapseWorkflowOrchestrator.

  Common Workflow Language

  •

  Apache License 2.0

  •22 forks•33 stars•33 issues•77 pull requests•Updated Jun 9, 2026Jun 9, 2026

• model-ad-data-manager

  Public
  Shell

  •

  Apache License 2.0

  •33 forks•00 stars•00 issues•00 pull requests•Updated Jun 5, 2026Jun 5, 2026

• schema-to-pojo

  Public
  The schema-to-pojo project was started because we wanted to programmatically generate the Plain Old Java Objects (POJOs) from JSON schemas. More specifically w…

  Java

  •1010 forks•33 stars•00 issues•00 pull requests•Updated Jun 4, 2026Jun 4, 2026

• BridgeWorkerPlatform-infra

  Public
  Setup and configure Infrastructure for Bridge Worker Platform app on AWS

  Other

  •88 forks•00 stars•00 issues•00 pull requests•Updated Jun 4, 2026Jun 4, 2026

• Bridge-Exporter-infra

  Public
  Setup Bridge exporter infrastructure

  Other

  •66 forks•00 stars•00 issues•11 pull request•Updated Jun 3, 2026Jun 3, 2026

• BridgeServer2-infra

  Public
  CloudFormation templates for BridgeServer2

  Shell

  •

  Other

  •1010 forks•00 stars•00 issues•00 pull requests•Updated Jun 3, 2026Jun 3, 2026

• synapse-ops-core

  Public
  Synapse Ops scripts workflows and CDK+workflow for creating self-hosted runners

  Shell

  •

  Apache License 2.0

  •66 forks•00 stars•00 issues•66 pull requests•Updated Jun 3, 2026Jun 3, 2026

• Synapse-Migration-Utility

  Public
  Utility to migrate one Synapse stack to another

  Java

  •

  Apache License 2.0

  •55 forks•00 stars•00 issues•22 pull requests•Updated Jun 3, 2026Jun 3, 2026

• Synapse-Code-Pipeline

  Public
  GitHub workflow to execute a Synapse job using Code Pipeline

  Apache License 2.0

  •33 forks•00 stars•00 issues•00 pull requests•Updated Jun 1, 2026Jun 1, 2026

• data_curator_config

  Public
  Project configurations for the Data Curator App

  2323 forks•22 stars•00 issues•11 pull request•Updated May 29, 2026May 29, 2026

• genie-bpc-pipeline

  Public
  GENIE BPC pipeline scripts

  genie

  genie

  R

  •

  MIT License

  •11 fork•44 stars•00 issues•33 pull requests•Updated May 28, 2026May 28, 2026

• neurolincsdreamchallenge

  Public
  R

  •22 forks•11 star•55 issues•11 pull request•Updated May 28, 2026May 28, 2026

• BridgeServer2

  Public
  Bridge Server 2.0 running on Spring Boot

  Java

  •

  Other

  •2525 forks•55 stars•00 issues•00 pull requests•Updated May 27, 2026May 27, 2026

• genie-bpc-quac-wrapper

  Public
  Wrapper for the GENIE BPC Quality Assurance Checklist for monitoring and notifications

  genie

  genie

  R

  •

  MIT License

  •11 fork•00 stars•00 issues•00 pull requests•Updated May 26, 2026May 26, 2026

• bioregistry-collection

  Public
  A Sage-curated list of bioregistry.io prefixes to use on Synapse.org

  Python

  •

  Apache License 2.0

  •22 forks•11 star•00 issues•00 pull requests•Updated May 22, 2026May 22, 2026