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Fix Bioconductor submission issues and update vignette - #2
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jpflores-13 wants to merge 12 commits into
Open
jpflores-13 wants to merge 12 commits into
jpflores-13 wants to merge 12 commits into
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- communityNums now reads from anchorCommunity on regions (not loopCommunity, which is assigned later in the function) - Sync loops <- scores before border adjustment so .compareNodeToComm always has scores, even when passed separately - Replace dplyr filter on loopCommunity with anchor-community-based median in .compareNodeToComm - Use isTRUE() for NA-safe comparison in border reassignment condition - Add .compareNodeToComm comm parameter to NSE suppression fix - Add test: loopCommunity equals intersection of anchor communities - Remove unused loopCalls argument from test-scoreInteractions.R
…artifacts Point loopcity_repo_dir at the correct project directory; add tarball, Rcheck, and batch log outputs to .gitignore.
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