Speed up CI: enable micromamba environment caching - #30

Merged

gb119 merged 13 commits into

mainfrom

copilot/stable-replace-conda-with-mamba

Mar 18, 2026

Commits on Dec 21, 2025

Change references from master to main
gb119
committed
409bdd0

Commits on Mar 16, 2026

Add measurelink sequence files
gb119
committed
5a43f37

Commits on Mar 17, 2026

Get mlseq files reading
gb119
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73b70cf
Update tests
gb119
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681e23a
Update test environments and dependencies to include chardet
gb119
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4b27e13

Commits on Mar 18, 2026

Fix Core tests to work with current package versions
gb119
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ef3e35d
Initial plan
Copilot
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a92656c
Replace conda with mamba (micromamba) in GitHub Actions workflows

Copilot
and
gb119
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d7e6074
Pin all GitHub Actions to SHA hashes for supply chain security

Copilot
and
gb119
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3786d3d
Pin Actions to SHA hashes, switch to micromamba, add permissions, fix test_is_zip for bytes with null bytes

Copilot
and
gb119
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68ccda1
Merge remote branch: rebase onto stable with SHA pinning and test_is_zip fix
Copilot
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d4c204a
Remove unsupported micromamba config --show-sources from Mamba information step

Copilot
and
gb119
committed
00020b7
Speed up mamba install step by enabling environment and download caching

Copilot
and
gb119
committed
12b82a1