Update uv.lock via uv sync -U

[jeromekelleher]

No description provided.

[codecov-commenter]

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 96.70%. Comparing base (c953398) to head (11c8830).
⚠️ Report is 2 commits behind head on main.

Additional details and impacted files

@@           Coverage Diff           @@
##             main     #456   +/-   ##
=======================================
  Coverage   96.70%   96.70%           
=======================================
  Files           8        8           
  Lines         910      910           
  Branches      182      182           
=======================================
  Hits          880      880           
  Misses         18       18           
  Partials       12       12           

Flag	Coverage Δ
python-tests	96.70% <ø> (ø)

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[jeromekelleher]

Do you know what's happening here @petrelharp? We have docs build failure because of these:

  WARNING: Error, no command xref target from tutorial:sec_tutorial_recapitation
758
  WARNING: Error, no command xref target from tutorial:sec_tutorial_simplification
759
  WARNING: Error, no command xref target from tutorial:sec_tutorial_adding_neutral_mutations
760
  WARNING: Error, no command xref target from tutorial:sec_left_in_tree_sequence
761
  WARNING: Error, no command xref target from tutorial:sec_time_units
762
  WARNING: Error, no command xref target from tutorial:sec_recapitate_with_migration
763
  WARNING: Error, no command xref target from tutorial:sec_left_in_tree_sequence
764
  WARNING: Error, no command xref target from tutorial:sec_extracting_individuals
765
  WARNING: Error, no command xref target from tutorial:sec_metadata
766
  WARNING: Error, no command xref target from tutorial:sec_tutorial_selected_mutations
767
  WARNING: Error, no command xref target from tutorial:sec_tutorial_selected_mutations
768
  WARNING: Error, no command xref target from tutorial:sec_output
769
  WARNING: Error, no command xref target from tutorial:sec_metadata
770
  WARNING: Error, no command xref target from tutorial:sec_individual_flags
771
  WARNING: Error, no command xref target from tutorial:sec_constants_and_flags
772
  WARNING: Error, no command xref target from tutorial:sec_overview_vacant_nodes
773
  WARNING: Error, no command xref target from tutorial:sec_tutorial_simplification
774
  WARNING: Error, no command xref target from tutorial:sec_left_in_tree_sequence
775
  WARNING: Error, no command xref target from tutorial:sec_left_in_tree_sequence
776
  WARNING: Error, no command xref target from tutorial:sec_tutorial_simplification
777
  WARNING: Error, no command xref target from tutorial:sec_tutorial_recapitation
778
  WARNING: Error, no command xref target from tutorial:sec_tutorial_simplification
779
  WARNING: Error, no command xref target from tutorial:sec_vignette_coalescent_diversity
780
  WARNING: Error, no command xref target from tutorial:sec_tutorial_mutation_metadata
781
  WARNING: Error, no command xref target from tutorial:sec_vignette_coalescent_diversity
782
  WARNING: Error, no command xref target from tutorial:sec_tutorial_vacant_nodes
783
  WARNING: Error, no command xref target from vignette_space:sec_metadata_using_top_level
784
  WARNING: Error, no command xref target from vignette_space:sec_tutorial_adding_neutral_mutations````

[petrelharp]

It reproduces locally. Looks like it's due to sphinx-argparse 0.6.0: sphinx-doc/sphinx-argparse#97

[jeromekelleher]

Ah, good digging. I guess the fix is to pin sphinx-argparse <0.6 for now then

[petrelharp]

Thanks!!!