[ci]: Bump the ci-dependencies group across 1 directory with 4 updates

[dependabot]

Bumps the ci-dependencies group with 4 updates in the / directory: r-lib/actions/setup-r, r-lib/actions/setup-pandoc, actions/deploy-pages and re-actors/alls-green.

Updates r-lib/actions/setup-r from 2.12.1 to 2.14.0

Changelog

Sourced from r-lib/actions/setup-r's changelog.

'v2.14.0` (2026-09-21)

• [setup-r]: use-public-rspm: true now sets up P3M (https://p3m.dev) on macOS as well, for all repositories.

• [setup-r] now installs flang 23 on R 4.7.0 (current R-devel) and later, as this is what CRAN uses now (#1107, @​andrjohns).

• [check-r-package] now uses the correct check directory when showing the testthat output (#1109, @​NotAFlightRisk).

v2.13.0 (2026-08-28)

• [setup-r] now retries r-hub.io HTTP failures (#1088, @​nbenn).

• [setup-r] now sets the correct RTOOLS environment variables on aarch64 Windows (@​vjymisal0, #1104).

• [setup-r] keep repositories if they are set by the build. E.g. aarch64 Windows builds now set them (@​jeroen, #1101).

• [setup-r] now retries transient failures when resolving the R version from api.r-hub.io, rather than failing the job on the first timeout or server error (@​nbenn, #1086).

• [setup-r-dependencies] now switches back to classic sudo, if available, on Linux. This fixes installing pak on Ubuntu 26.04 runners (@​jeroen, #1096).

v2.12.1 (2026-06-23)

• [setup-r] now avoids a warning about an url.parse() deprecation (#1074).

• [setup-r-dependencies] now uses quarto-dev/quarto-actions v2.2.0 (@​jdblischak, #1076).

• Examples: test-coverage.yaml now uses codecov/codecov-action v7 (@​shikokuchuo, #1081).

• New example claude-investigate.yaml workflow (@​DavisVaughan, #1084).

v2.12.0 (2026-04-29)

• All node.js actions use node 24 now. Relatedly, all example workflows use recent versions of actions that use node 24.

• [setup-r] now uses use-public-rspm: true by default on Linux and Windows. macOS binaries require further opt-in with use-public-rspm: always.

... (truncated)

Commits

• f9a764f Update NEWS before release (#1111)
• 3a1a90f [setup-r] use-public-rspm: true is TRUE for all repos on macOS (#1110)
• 0e37acd setup-r: Add installation for flang on mac r-devel (#1108)
• 196dc04 [check-r-package] Use the resolved check-dir when showing testthat output (#1...
• 8efa420 Fix typo (#1106)
• 465b7d8 NEWS for 2.13.0 (#1105)
• d06a540 [setup-r] retry transient r-hub.io request failures (#1088)
• ed9aa85 fix(setup-r): export correct RTOOLS HOME env vars on Windows ARM64 and x64 (#...
• c86f32c setup-r-dependencies: set JAVA_HOME on Windows runners from Java 21 env vars ...
• 2a66450 setup-r-dependencies: switch back to classic sudo on runners with sudo-rs (#1...
• Additional commits viewable in compare view

Updates r-lib/actions/setup-pandoc from 2.12.1 to 2.14.0

Changelog

Sourced from r-lib/actions/setup-pandoc's changelog.

'v2.14.0` (2026-09-21)

• [setup-r]: use-public-rspm: true now sets up P3M (https://p3m.dev) on macOS as well, for all repositories.

• [setup-r] now installs flang 23 on R 4.7.0 (current R-devel) and later, as this is what CRAN uses now (#1107, @​andrjohns).

• [check-r-package] now uses the correct check directory when showing the testthat output (#1109, @​NotAFlightRisk).

v2.13.0 (2026-08-28)

• [setup-r] now retries r-hub.io HTTP failures (#1088, @​nbenn).

• [setup-r] now sets the correct RTOOLS environment variables on aarch64 Windows (@​vjymisal0, #1104).

• [setup-r] keep repositories if they are set by the build. E.g. aarch64 Windows builds now set them (@​jeroen, #1101).

• [setup-r] now retries transient failures when resolving the R version from api.r-hub.io, rather than failing the job on the first timeout or server error (@​nbenn, #1086).

• [setup-r-dependencies] now switches back to classic sudo, if available, on Linux. This fixes installing pak on Ubuntu 26.04 runners (@​jeroen, #1096).

v2.12.1 (2026-06-23)

• [setup-r] now avoids a warning about an url.parse() deprecation (#1074).

• [setup-r-dependencies] now uses quarto-dev/quarto-actions v2.2.0 (@​jdblischak, #1076).

• Examples: test-coverage.yaml now uses codecov/codecov-action v7 (@​shikokuchuo, #1081).

• New example claude-investigate.yaml workflow (@​DavisVaughan, #1084).

v2.12.0 (2026-04-29)

• All node.js actions use node 24 now. Relatedly, all example workflows use recent versions of actions that use node 24.

• [setup-r] now uses use-public-rspm: true by default on Linux and Windows. macOS binaries require further opt-in with use-public-rspm: always.

... (truncated)

Commits

• f9a764f Update NEWS before release (#1111)
• 3a1a90f [setup-r] use-public-rspm: true is TRUE for all repos on macOS (#1110)
• 0e37acd setup-r: Add installation for flang on mac r-devel (#1108)
• 196dc04 [check-r-package] Use the resolved check-dir when showing testthat output (#1...
• 8efa420 Fix typo (#1106)
• 465b7d8 NEWS for 2.13.0 (#1105)
• d06a540 [setup-r] retry transient r-hub.io request failures (#1088)
• ed9aa85 fix(setup-r): export correct RTOOLS HOME env vars on Windows ARM64 and x64 (#...
• c86f32c setup-r-dependencies: set JAVA_HOME on Windows runners from Java 21 env vars ...
• 2a66450 setup-r-dependencies: switch back to classic sudo on runners with sudo-rs (#1...
• Additional commits viewable in compare view

Updates actions/deploy-pages from 5.0.0 to 5.0.1

Release notes

Sourced from actions/deploy-pages's releases.

v5.0.1

Changelog

• Add backoff and jitter to deployment polling @​yoannchaudet (#444)
• Improve deployment request test coverage @​adwitiyagoyal (#440)

---

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Commits

• 368f825 Merge pull request #444 from actions/yoannchaudet-deployment-polling-backoff
• 7e97763 Validate deployment polling intervals
• 0143e11 Add backoff and jitter to deployment polling
• 5e98f10 Merge pull request #440 from actions/user/adwitiya
• 8b0625a Improve deployment request test coverage
• See full diff in compare view

Updates re-actors/alls-green from 1.2.2 to 1.3.0

Release notes

Sourced from re-actors/alls-green's releases.

v1.3.0

🛡️ What's Unmessed

[!caution]

There was a small command injection risk in prior versions. I consider it very low because of the specifics of the action use case. But still, do upgrade, okay?

@​illera88💰 fixed this template injection bug in #37 by passing inputs via env vars.

See GHSA-gj76-h2ch-5m76 for more detail that was first reported by @​Corbynx010💰 while I was at EuroPython.

✨ What's Improved

I did a bunch of internal refactoring including hints of what @​max-sixty💰 reported in #23. And took a small patch of @​krokofant💰 in. This involved a bunch of preparatory infra work with testing infra.

One notable improvement is that now thanks to @​tomasr8💰's and @​hugovk💰's UX suggestions in #31, the gate status output is colored in the console and should be easier to scan in the log output per line. They entries now have leading ✓/❌ acceptance marks and the actual incoming job outcomes are labeled with 🟢/🔴/⬜/⚫.

🐛 What's Fixed

The job-statuses summary could print "Some of the allowed to be skipped jobs did not succeed" based on the wrong condition — it's now tied to allowed-skips as intended, not allowed-failures.

💪 New Contributors

• @​Corbynx010💰 lurked in GHSA-gj76-h2ch-5m76 before everyone else 😉
• @​illera88 made their first contribution in #37 and GHSA-gj76-h2ch-5m76
• @​krokofant and @​max-sixty first contributed in #23
• @​tomasr8 and @​hugovk in #31

🪞 Full Diff: re-actors/alls-green@v1.2.2...v1.3.0

🧔‍♂️ Release Manager: @​webknjaz 🇺🇦

💬 Discuss on Bluesky 🦋, on Mastodon 🐘 and on GitHub.

Commits

• b5b5b37 Merge pull request #38 from re-actors/pre-commit-ci-update-config
• bd6edd6 [pre-commit.ci] pre-commit autoupdate
• 3967c81 💅 Make the output easier to scan
• e68df08 💅 Style job statuses title with a 🔮
• 62d37b2 🧪 Unxfail 'success-of-some-allowed-to-skip-or-fail'
• 7b5df6d 💅 Add a Codecov badge to README
• 2410c4c 🐛 Correct reporting failed skipped jobs
• 6457593 💅 Add a GH Sponsors badge
• a617895 💅 Add a pre-commit.ci badge
• 8de05dc 🧪 Force ctrace core in coveragepy
• Additional commits viewable in compare view

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