Skip to content

removeElem error #25

Description

@jsoghigian

Hi,

Trying to use this tool on a sorted BAM file to subsample to a much lower coverage for testing. I'm getting the following error from the below command:
variant H10.sorted.bam -m 2 -v -b > H10.subset.bam
removeElem: elem of value 327553260 is above max bin 2001,250000000,0

Not sure what that number is, or how to address it - any idea?

Activity

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Projects

    No projects

      Milestone

      No milestone

      Relationships

      None yet

      Development

      No branches or pull requests

      Issue actions