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Extract patch centers for patients without aneurysm - #30

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youssefassis merged 2 commits into
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fix/extract-points-healthy
Sep 30, 2026
Merged

youssefassis merged 2 commits into
mainfrom
fix/extract-points-healthy

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deepaneseg-extract-points now handles patients without aneurysm (no pts aneurysm entry), which datasets like ADAM contain. They get vessel and parenchyma points as usual.

extract_points_from_patient read the 'pts aneurysm' entry directly and
stopped on patients without it. It now uses read_aneurysm_spheres, so
such patients get vessel and parenchyma points with nothing to avoid.
@youssefassis
youssefassis merged commit d3c4519 into main Sep 30, 2026
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@youssefassis
youssefassis deleted the fix/extract-points-healthy branch September 30, 2026 05:42
youssefassis added a commit that referenced this pull request Sep 30, 2026
Extract patch centers for patients without aneurysm
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