Release 0.1.0: flit + uv tooling, CI, version bump

.github/workflows/test.yml

@@ -0,0 +1,13 @@
+name: test
+on:
+  push:
+    branches: [main]
+  pull_request:
+jobs:
+  pytest:
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v4
+      - uses: astral-sh/setup-uv@v6
+      - run: uv sync --locked
+      - run: uv run pytest -q

README.md

@@ -20,5 +20,16 @@ You can install the latest development version of Cognax directly from GitHub us
 pip install git+https://github.com/compmem/cognax
 ```
 
-> [!NOTE] 
-> JAX is not listed as a dependency, but it must be installed separately before using Cognax. See the [JAX Docs](https://jax.readthedocs.io/en/latest/installation.html) for more information.
+## Development
+
+Cognax uses [uv](https://docs.astral.sh/uv/) for local development. To create a development environment and install the project with its development dependencies, run:
+
+```bash
+uv sync
+```
+
+Run tests through uv:
+
+```bash
+uv run pytest
+```

cognax/__init__.py

@@ -1,3 +1,5 @@
 from cognax import decisions, df_util, experimental, joint, util
 
+__version__: str = "0.1.0"
+
 __all__ = ["decisions", "df_util", "experimental", "joint", "util"]

pyproject.toml

@@ -1,19 +1,19 @@
 [build-system]
-requires = ["setuptools"]
-build-backend = "setuptools.build_meta"
+requires = ["flit_core>=3.12,<4"]
+build-backend = "flit_core.buildapi"
 
 [project]
 name = "cognax"
-version = "0.0.1"
+
+# This is set automatically by flit using `cognax.__version__`
+dynamic = ["version"]
 description = "Build, fit, and sample from cognitive models with JAX + NumPyro."
 readme = "README.md"
 requires-python = ">=3.12"
-license = {file = "LICENSE"}
-authors = [
-    {name = "Ami Falk", email="aaf2pz@virginia.edu"},
-]
+license = { file = "LICENSE" }
+authors = [{ name = "Ami Falk", email = "aaf2pz@virginia.edu" }]
 keywords = ["cognitive-science", "modeling-tools", "jax", "numpyro"]
-urls = {repository = "https://github.com/compmem/cognax/"}
+urls = { repository = "https://github.com/compmem/cognax/" }
 dependencies = [
     "jax >= 0.11",
     "numpyro >= 0.22",
@@ -23,4 +23,6 @@ dependencies = [
 
 [project.optional-dependencies]
 examples = ["arviz", "jupyter", "matplotlib"]
-test = ["pytest", "scipy"]
+
+[dependency-groups]
+dev = ["pytest", "ruff", "scipy"]