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Add data locations

Mark Teese edited this page Feb 15, 2018 · 4 revisions

settings files

Test datafiles

  • find the "examples" folder in the"eccpy" folder where the program is installed, (e.g. D:\EC50\ECCpy_program\eccpy\examples)
  • copy the three example datafiles to a location on your computer
  • in your settings excel file, change the "input file directory" folder. Add a desired "output file directory" folder.
  • move on to the next step, Adjust user settings

Your datafiles

  • move/copy your files containing dose and response data to your "input_datafile" directory
  • fill out the files tab of the settings excel file
    • "input file directory" / "output file directory" : paste folder path
    • "response data file" : paste filename
    • "dose conc file" : paste filename, or "None" if dose data is in the response data file
    • "run_curvefit" : set TRUE to calculated EC50 values
    • "run_gatherer" : set TRUE to gather and compare the EC50 values from multiple experiments
    • "response dataformat" : this text string depends on your input data format
  • NOTE: for further details regarding the "files" tab, see the "explanations" tab
  • NOTE: colours and formatting will be ignored

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