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Adjust user settings

Mark Teese edited this page Feb 15, 2018 · 8 revisions

Test datafiles

  • The settings in the template are already adjusted for the test datafiles
  • Move on to examine the "samples" tab

Your datafiles

settings

  • the highlighted settings must be adjusted to suit your data
  • improper settings will result in the following:
    • a) exclusion of data in the pre-filtering step. No curve fitted. Python output of "insufficient_highresponse_datapoints", or "insufficient_lowresponse_datapoints".
    • b) correct curvefitting, but good data is improperly labelled as "data_needs_checking" (label indicating bad data).

How to determine the correct values?

  • run ECCpy on the test datafiles and play around with the settings
  • read the detailed notes for each variable in the excel settings file
  • if you're completely lost, send us an email containing example data (link to GitHub profile)

NEXT STEP: Adjust samplenames

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